RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
SNRPD3-201ENST00000215829 TTC21BQ7Z4L5 1316 aa21.54■■□□□ 1.04
SNRPD3-201ENST00000215829 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
SNRPD3-201ENST00000215829 NRKQ7Z2Y5 1582 aa21.54■■□□□ 1.04
SNRPD3-201ENST00000215829 MST1RQ04912 1400 aa21.54■■□□□ 1.04
SNRPD3-201ENST00000215829 ORAI2Q96SN7 254 aa21.53■■□□□ 1.04
SNRPD3-201ENST00000215829 NME9Q86XW9 330 aa21.52■■□□□ 1.04
SNRPD3-201ENST00000215829 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
SNRPD3-201ENST00000215829 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
SNRPD3-201ENST00000215829 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
SNRPD3-201ENST00000215829 PNISRQ8TF01 805 aaKnown RBP21.49■■□□□ 1.03
SNRPD3-201ENST00000215829 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
SNRPD3-201ENST00000215829 PSME1Q06323 249 aa21.47■■□□□ 1.03
SNRPD3-201ENST00000215829 FAM9BQ8IZU0 186 aa21.47■■□□□ 1.03
SNRPD3-201ENST00000215829 COG3Q96JB2 828 aa21.47■■□□□ 1.03
SNRPD3-201ENST00000215829 ZRANB1Q9UGI0 708 aa21.47■■□□□ 1.03
SNRPD3-201ENST00000215829 LTBP4Q8N2S1 1624 aa21.46■■□□□ 1.03
SNRPD3-201ENST00000215829 FOXO3O43524 673 aa21.46■■□□□ 1.03
SNRPD3-201ENST00000215829 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
SNRPD3-201ENST00000215829 MTHFSP49914 203 aa21.43■■□□□ 1.02
SNRPD3-201ENST00000215829 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
SNRPD3-201ENST00000215829 OVOS2A0A0J9YW53 1432 aa21.42■■□□□ 1.02
SNRPD3-201ENST00000215829 OVOS2Q6IE36 1432 aa21.42■■□□□ 1.02
SNRPD3-201ENST00000215829 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
SNRPD3-201ENST00000215829 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
SNRPD3-201ENST00000215829 PIK3C2AO00443 1686 aa21.41■■□□□ 1.02
SNRPD3-201ENST00000215829 AATKQ6ZMQ8 1374 aa21.4■■□□□ 1.02
SNRPD3-201ENST00000215829 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
SNRPD3-201ENST00000215829 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
SNRPD3-201ENST00000215829 NLRP6P59044 892 aa21.38■■□□□ 1.01
SNRPD3-201ENST00000215829 BRINP3Q76B58 766 aa21.38■■□□□ 1.01
SNRPD3-201ENST00000215829 CFAP53Q96M91 514 aa21.38■■□□□ 1.01
SNRPD3-201ENST00000215829 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
SNRPD3-201ENST00000215829 FBLN1P23142 703 aa21.37■■□□□ 1.01
SNRPD3-201ENST00000215829 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
SNRPD3-201ENST00000215829 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
SNRPD3-201ENST00000215829 NPHP3Q7Z494 1330 aa21.37■■□□□ 1.01
SNRPD3-201ENST00000215829 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
SNRPD3-201ENST00000215829 TRPM3Q9HCF6 1732 aaPredicted RBP21.35■■□□□ 1.01
SNRPD3-201ENST00000215829 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNRPD3-201ENST00000215829 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
SNRPD3-201ENST00000215829 DDX17Q92841 729 aaKnown RBP21.33■■□□□ 1.01
SNRPD3-201ENST00000215829 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
SNRPD3-201ENST00000215829 MARF1Q9Y4F3 1742 aaKnown RBP21.33■■□□□ 1
SNRPD3-201ENST00000215829 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
SNRPD3-201ENST00000215829 SBNO1A3KN83 1393 aa21.32■■□□□ 1
SNRPD3-201ENST00000215829 INSRP06213 1382 aa21.32■■□□□ 1
SNRPD3-201ENST00000215829 ADAMTS8Q9UP79 889 aa21.32■■□□□ 1
SNRPD3-201ENST00000215829 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
SNRPD3-201ENST00000215829 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
SNRPD3-201ENST00000215829 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
SNRPD3-201ENST00000215829 PXDNQ92626 1479 aa21.3■■□□□ 1
SNRPD3-201ENST00000215829 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
SNRPD3-201ENST00000215829 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
SNRPD3-201ENST00000215829 SHPRHQ149N8 1683 aa21.29■■□□□ 1
SNRPD3-201ENST00000215829 ALS2Q96Q42 1657 aa21.28■■□□□ 1
SNRPD3-201ENST00000215829 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
SNRPD3-201ENST00000215829 SOX12O15370 315 aa21.28■■□□□ 1
SNRPD3-201ENST00000215829 LMOD2Q6P5Q4 547 aa21.28■■□□□ 1
SNRPD3-201ENST00000215829 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
SNRPD3-201ENST00000215829 SOS2Q07890 1332 aaPredicted RBP21.27■■□□□ 1
SNRPD3-201ENST00000215829 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
SNRPD3-201ENST00000215829 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
SNRPD3-201ENST00000215829 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
SNRPD3-201ENST00000215829 KCNH5Q8NCM2 988 aa21.25■□□□□ 0.99
SNRPD3-201ENST00000215829 SPATA31A3Q5VYP0 1347 aa21.25■□□□□ 0.99
SNRPD3-201ENST00000215829 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
SNRPD3-201ENST00000215829 TNS3Q68CZ2 1445 aa21.25■□□□□ 0.99
SNRPD3-201ENST00000215829 USP19O94966 1318 aa21.24■□□□□ 0.99
SNRPD3-201ENST00000215829 NHSL1Q5SYE7 1610 aa21.23■□□□□ 0.99
SNRPD3-201ENST00000215829 SLIT3O75094 1523 aa21.22■□□□□ 0.99
SNRPD3-201ENST00000215829 ARHGEF10O15013 1369 aa21.22■□□□□ 0.99
SNRPD3-201ENST00000215829 GCP02774 474 aa21.22■□□□□ 0.99
SNRPD3-201ENST00000215829 NFAT5O94916 1531 aa21.22■□□□□ 0.99
SNRPD3-201ENST00000215829 PEAK1Q9H792 1746 aa21.22■□□□□ 0.99
SNRPD3-201ENST00000215829 KIF24Q5T7B8 1368 aa21.21■□□□□ 0.99
SNRPD3-201ENST00000215829 TOM1O60784 492 aa21.21■□□□□ 0.99
SNRPD3-201ENST00000215829 ROBO1Q9Y6N7 1651 aa21.21■□□□□ 0.99
SNRPD3-201ENST00000215829 U2AF1L5P0DN76 240 aaPredicted RBP21.2■□□□□ 0.99
SNRPD3-201ENST00000215829 IL13P35225 146 aa21.2■□□□□ 0.99
SNRPD3-201ENST00000215829 U2AF1Q01081 240 aaKnown RBP eCLIP21.2■□□□□ 0.99
SNRPD3-201ENST00000215829 FLT4P35916 1363 aa21.2■□□□□ 0.98
SNRPD3-201ENST00000215829 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
SNRPD3-201ENST00000215829 AMPHP49418 695 aa21.2■□□□□ 0.98
SNRPD3-201ENST00000215829 ZBED9Q6R2W3 1325 aa21.19■□□□□ 0.98
SNRPD3-201ENST00000215829 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
SNRPD3-201ENST00000215829 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
SNRPD3-201ENST00000215829 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
SNRPD3-201ENST00000215829 CCDC146Q8IYE0 955 aa21.17■□□□□ 0.98
SNRPD3-201ENST00000215829 LTN1O94822 1766 aa21.17■□□□□ 0.98
SNRPD3-201ENST00000215829 PLEKHG5O94827 1062 aa21.16■□□□□ 0.98
SNRPD3-201ENST00000215829 HOXC9P31274 260 aa21.16■□□□□ 0.98
SNRPD3-201ENST00000215829 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
SNRPD3-201ENST00000215829 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
SNRPD3-201ENST00000215829 ARHGEF25Q86VW2 580 aa21.15■□□□□ 0.98
SNRPD3-201ENST00000215829 AHDC1Q5TGY3 1603 aaPredicted RBP21.15■□□□□ 0.98
SNRPD3-201ENST00000215829 IP6K1Q92551 441 aa21.15■□□□□ 0.98
SNRPD3-201ENST00000215829 RUNDC1Q96C34 613 aa21.15■□□□□ 0.98
SNRPD3-201ENST00000215829 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
SNRPD3-201ENST00000215829 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms