RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 NCKAP5LQ9HCH0 1330 aa33.91■■■■□ 3.02
RTN4R-201ENST00000043402 TCERG1O14776 1098 aaKnown RBP33.91■■■■□ 3.02
RTN4R-201ENST00000043402 FBLN1P23142 703 aa33.91■■■■□ 3.02
RTN4R-201ENST00000043402 NUDT16Q96DE0 195 aaKnown RBP33.91■■■■□ 3.02
RTN4R-201ENST00000043402 ROBO2Q9HCK4 1378 aa33.89■■■■□ 3.02
RTN4R-201ENST00000043402 DIAPH1O60610 1272 aaKnown RBP33.88■■■■□ 3.01
RTN4R-201ENST00000043402 EDC4Q6P2E9 1401 aaKnown RBP33.88■■■■□ 3.01
RTN4R-201ENST00000043402 POLKQ9UBT6 870 aa33.87■■■■□ 3.01
RTN4R-201ENST00000043402 PLEKHG1Q9ULL1 1385 aa33.86■■■■□ 3.01
RTN4R-201ENST00000043402 SKAP1Q86WV1 359 aa33.85■■■■□ 3.01
RTN4R-201ENST00000043402 CCDC61Q9Y6R9 512 aa33.85■■■■□ 3.01
RTN4R-201ENST00000043402 C3P01024 1663 aa33.85■■■■□ 3.01
RTN4R-201ENST00000043402 TMPOP42166 694 aaKnown RBP33.85■■■■□ 3.01
RTN4R-201ENST00000043402 CDC42BPGQ6DT37 1551 aa33.84■■■■□ 3.01
RTN4R-201ENST00000043402 RARSP54136 660 aaKnown RBP33.84■■■■□ 3.01
RTN4R-201ENST00000043402 MAP2P11137 1827 aaKnown RBP33.83■■■■□ 3.01
RTN4R-201ENST00000043402 NME9Q86XW9 330 aa33.82■■■■□ 3.01
RTN4R-201ENST00000043402 PRR36Q9H6K5 1346 aa33.82■■■■□ 3
RTN4R-201ENST00000043402 PDE3AQ14432 1141 aa33.81■■■■□ 3
RTN4R-201ENST00000043402 TRIM35Q9UPQ4 493 aa33.81■■■■□ 3
RTN4R-201ENST00000043402 ZRANB1Q9UGI0 708 aa33.81■■■■□ 3
RTN4R-201ENST00000043402 MON2Q7Z3U7 1717 aa33.8■■■■□ 3
RTN4R-201ENST00000043402 MYH16Q9H6N6 1097 aa33.8■■■■□ 3
RTN4R-201ENST00000043402 CENPQQ7L2Z9 268 aaPredicted RBP33.79■■■■□ 3
RTN4R-201ENST00000043402 MAPK8IP3Q9UPT6 1336 aa33.79■■■■□ 3
RTN4R-201ENST00000043402 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.79■■■■□ 3
RTN4R-201ENST00000043402 PPM1GO15355 546 aaPredicted RBP33.79■■■■□ 3
RTN4R-201ENST00000043402 MS4A1P11836 297 aa33.79■■■■□ 3
RTN4R-201ENST00000043402 AKAP12Q02952 1782 aa33.77■■■■□ 3
RTN4R-201ENST00000043402 PLPPR3Q6T4P5 718 aa33.77■■■■□ 3
RTN4R-201ENST00000043402 SLC26A8Q96RN1 970 aa33.77■■■■□ 3
RTN4R-201ENST00000043402 PTPRUQ92729 1446 aa33.76■■■□□ 2.99
RTN4R-201ENST00000043402 FER1L4A9Z1Z3 1794 aa33.75■■■□□ 2.99
RTN4R-201ENST00000043402 PANK1Q8TE04 598 aa33.75■■■□□ 2.99
RTN4R-201ENST00000043402 EMILIN1Q9Y6C2 1016 aa33.75■■■□□ 2.99
RTN4R-201ENST00000043402 PDE4AP27815 886 aa33.74■■■□□ 2.99
RTN4R-201ENST00000043402 CANXP27824 592 aaKnown RBP33.74■■■□□ 2.99
RTN4R-201ENST00000043402 FRAT1Q92837 279 aaPredicted RBP33.74■■■□□ 2.99
RTN4R-201ENST00000043402 SLIT1O75093 1534 aa33.73■■■□□ 2.99
RTN4R-201ENST00000043402 ARHGAP23Q9P227 1491 aa33.73■■■□□ 2.99
RTN4R-201ENST00000043402 EID1Q9Y6B2 187 aa33.73■■■□□ 2.99
RTN4R-201ENST00000043402 ITSN1Q15811 1721 aa33.73■■■□□ 2.99
RTN4R-201ENST00000043402 FCHSD2O94868 740 aa33.72■■■□□ 2.99
RTN4R-201ENST00000043402 TSR2Q969E8 191 aaKnown RBP33.72■■■□□ 2.99
RTN4R-201ENST00000043402 LRRC7Q96NW7 1537 aa33.72■■■□□ 2.99
RTN4R-201ENST00000043402 RIPK4P57078 832 aa33.71■■■□□ 2.99
RTN4R-201ENST00000043402 BCL2L13Q9BXK5 485 aa33.71■■■□□ 2.99
RTN4R-201ENST00000043402 BACH2Q9BYV9 841 aa33.71■■■□□ 2.99
RTN4R-201ENST00000043402 RSPH6AQ9H0K4 717 aa33.71■■■□□ 2.99
RTN4R-201ENST00000043402 PNNQ9H307 717 aaKnown RBP33.71■■■□□ 2.99
RTN4R-201ENST00000043402 COG6Q9Y2V7 657 aa33.71■■■□□ 2.99
RTN4R-201ENST00000043402 AATKQ6ZMQ8 1374 aa33.7■■■□□ 2.99
RTN4R-201ENST00000043402 ZNF692Q9BU19 519 aaPredicted RBP33.7■■■□□ 2.98
RTN4R-201ENST00000043402 COG3Q96JB2 828 aa33.68■■■□□ 2.98
RTN4R-201ENST00000043402 TNNQ9UQP3 1299 aa33.67■■■□□ 2.98
RTN4R-201ENST00000043402 PRKAR2BP31323 418 aa33.67■■■□□ 2.98
RTN4R-201ENST00000043402 CDK12Q9NYV4 1490 aaPredicted RBP33.66■■■□□ 2.98
RTN4R-201ENST00000043402 TOPAZ1Q8N9V7 1692 aa33.65■■■□□ 2.98
RTN4R-201ENST00000043402 IL16Q14005 1332 aa33.65■■■□□ 2.98
RTN4R-201ENST00000043402 RLBP1P12271 317 aa33.65■■■□□ 2.98
RTN4R-201ENST00000043402 IL13P35225 146 aa33.65■■■□□ 2.98
RTN4R-201ENST00000043402 NUTM2FA1L443 756 aa33.64■■■□□ 2.98
RTN4R-201ENST00000043402 TRHP20396 242 aaPredicted RBP33.64■■■□□ 2.98
RTN4R-201ENST00000043402 EXOSC9Q06265 439 aaKnown RBP33.64■■■□□ 2.98
RTN4R-201ENST00000043402 AMOTL2Q9Y2J4 779 aa33.64■■■□□ 2.98
RTN4R-201ENST00000043402 HMOX1P09601 288 aa33.63■■■□□ 2.97
RTN4R-201ENST00000043402 RRS1Q15050 365 aaKnown RBP33.63■■■□□ 2.97
RTN4R-201ENST00000043402 CLUAP1Q96AJ1 413 aa33.62■■■□□ 2.97
RTN4R-201ENST00000043402 TBX22Q9Y458 520 aa33.62■■■□□ 2.97
RTN4R-201ENST00000043402 IGHDP01880 384 aa33.62■■■□□ 2.97
RTN4R-201ENST00000043402 CT47B1P0C2W7 299 aaPredicted RBP33.62■■■□□ 2.97
RTN4R-201ENST00000043402 ACEP12821 1306 aa33.61■■■□□ 2.97
RTN4R-201ENST00000043402 ANP32AP39687 249 aaKnown RBP33.61■■■□□ 2.97
RTN4R-201ENST00000043402 THEMISQ8N1K5 641 aaPredicted RBP33.61■■■□□ 2.97
RTN4R-201ENST00000043402 PHACTR3Q96KR7 559 aa33.61■■■□□ 2.97
RTN4R-201ENST00000043402 NRKQ7Z2Y5 1582 aa33.6■■■□□ 2.97
RTN4R-201ENST00000043402 PLEKHG3A1L390 1219 aa33.6■■■□□ 2.97
RTN4R-201ENST00000043402 TTC21BQ7Z4L5 1316 aa33.59■■■□□ 2.97
RTN4R-201ENST00000043402 IPO9Q96P70 1041 aaKnown RBP33.54■■■□□ 2.96
RTN4R-201ENST00000043402 PTCH1Q13635 1447 aa33.54■■■□□ 2.96
RTN4R-201ENST00000043402 NFE2L2Q16236 605 aa33.54■■■□□ 2.96
RTN4R-201ENST00000043402 USP6P35125 1406 aa33.54■■■□□ 2.96
RTN4R-201ENST00000043402 NEFMP07197 916 aa33.53■■■□□ 2.96
RTN4R-201ENST00000043402 ERICH6Q7L0X2 663 aa33.53■■■□□ 2.96
RTN4R-201ENST00000043402 SSH1Q8WYL5 1049 aa33.52■■■□□ 2.96
RTN4R-201ENST00000043402 OVOS2A0A0J9YW53 1432 aa33.51■■■□□ 2.96
RTN4R-201ENST00000043402 OVOS2Q6IE36 1432 aa33.51■■■□□ 2.96
RTN4R-201ENST00000043402 ZKSCAN2Q63HK3 967 aa33.51■■■□□ 2.95
RTN4R-201ENST00000043402 SMC4Q9NTJ3 1288 aa33.51■■■□□ 2.95
RTN4R-201ENST00000043402 DIP2AQ14689 1571 aa33.5■■■□□ 2.95
RTN4R-201ENST00000043402 NOP58Q9Y2X3 529 aaKnown RBP33.49■■■□□ 2.95
RTN4R-201ENST00000043402 AAMPQ13685 434 aa33.48■■■□□ 2.95
RTN4R-201ENST00000043402 NPM2Q86SE8 214 aaKnown RBP33.48■■■□□ 2.95
RTN4R-201ENST00000043402 SSH2Q76I76 1423 aa33.48■■■□□ 2.95
RTN4R-201ENST00000043402 PAK3O75914 559 aaPredicted RBP33.48■■■□□ 2.95
RTN4R-201ENST00000043402 RGS3P49796 1198 aa33.48■■■□□ 2.95
RTN4R-201ENST00000043402 PCDHB15Q9Y5E8 787 aa33.48■■■□□ 2.95
RTN4R-201ENST00000043402 THUMPD2Q9BTF0 503 aaKnown RBP33.46■■■□□ 2.95
RTN4R-201ENST00000043402 XRN1Q8IZH2 1706 aaKnown RBP33.45■■■□□ 2.95
RTN4R-201ENST00000043402 MVPQ14764 893 aaKnown RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms