RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 VSIG10Q8N0Z9 540 aa28.01■■■□□ 2.07
TARBP1-201ENST00000040877 BICD2Q8TD16 824 aa28.01■■■□□ 2.07
TARBP1-201ENST00000040877 SURF6O75683 361 aaKnown RBP28.01■■■□□ 2.07
TARBP1-201ENST00000040877 RAD21O60216 631 aa28■■■□□ 2.07
TARBP1-201ENST00000040877 SULT6B1Q6IMI4 303 aa28■■■□□ 2.07
TARBP1-201ENST00000040877 TBC1D2BQ9UPU7 963 aa28■■■□□ 2.07
TARBP1-201ENST00000040877 VPS37CA5D8V6 355 aaPredicted RBP27.99■■■□□ 2.07
TARBP1-201ENST00000040877 GNAI2P04899 355 aa27.98■■■□□ 2.07
TARBP1-201ENST00000040877 CCT4P50991 539 aaKnown RBP27.98■■■□□ 2.07
TARBP1-201ENST00000040877 FBXW7Q969H0 707 aa27.98■■■□□ 2.07
TARBP1-201ENST00000040877 SPG7Q9UQ90 795 aa27.98■■■□□ 2.07
TARBP1-201ENST00000040877 CDK13Q14004 1512 aaKnown RBP27.98■■■□□ 2.07
TARBP1-201ENST00000040877 FSD1Q9BTV5 496 aa27.98■■■□□ 2.07
TARBP1-201ENST00000040877 HDGFL1Q5TGJ6 251 aa27.97■■■□□ 2.07
TARBP1-201ENST00000040877 ZNF428Q96B54 188 aa27.96■■■□□ 2.07
TARBP1-201ENST00000040877 CDCA7LQ96GN5 454 aa27.96■■■□□ 2.07
TARBP1-201ENST00000040877 NAIPQ13075 1403 aa27.96■■■□□ 2.07
TARBP1-201ENST00000040877 IPO7O95373 1038 aaKnown RBP27.96■■■□□ 2.07
TARBP1-201ENST00000040877 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.95■■■□□ 2.06
TARBP1-201ENST00000040877 CCDC73Q6ZRK6 1079 aa27.94■■■□□ 2.06
TARBP1-201ENST00000040877 MCM2P49736 904 aa27.94■■■□□ 2.06
TARBP1-201ENST00000040877 ZNF530Q6P9A1 599 aaPredicted RBP27.94■■■□□ 2.06
TARBP1-201ENST00000040877 XBP1P17861 261 aa27.94■■■□□ 2.06
TARBP1-201ENST00000040877 A0A0U1RQG5 324 aaPredicted RBP27.93■■■□□ 2.06
TARBP1-201ENST00000040877 SART3Q15020 963 aaKnown RBP27.92■■■□□ 2.06
TARBP1-201ENST00000040877 BRMS1Q9HCU9 246 aa27.92■■■□□ 2.06
TARBP1-201ENST00000040877 FCHSD2O94868 740 aa27.92■■■□□ 2.06
TARBP1-201ENST00000040877 RBM42Q9BTD8 480 aaKnown RBP27.91■■■□□ 2.06
TARBP1-201ENST00000040877 SLC4A2P04920 1241 aa27.91■■■□□ 2.06
TARBP1-201ENST00000040877 CCDC61Q9Y6R9 512 aa27.91■■■□□ 2.06
TARBP1-201ENST00000040877 CABP4P57796 275 aa27.91■■■□□ 2.06
TARBP1-201ENST00000040877 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 CD109Q6YHK3 1445 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 CCDC27Q2M243 656 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 SLC26A8Q96RN1 970 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
TARBP1-201ENST00000040877 TOM1L2Q6ZVM7 507 aa27.89■■■□□ 2.05
TARBP1-201ENST00000040877 CCDC70Q6NSX1 233 aa27.88■■■□□ 2.05
TARBP1-201ENST00000040877 SASS6Q6UVJ0 657 aa27.88■■■□□ 2.05
TARBP1-201ENST00000040877 SRCIN1Q9C0H9 1055 aa27.88■■■□□ 2.05
TARBP1-201ENST00000040877 NOB1Q9ULX3 412 aaKnown RBP27.88■■■□□ 2.05
TARBP1-201ENST00000040877 CAMSAP2Q08AD1 1489 aa27.87■■■□□ 2.05
TARBP1-201ENST00000040877 TNNT3P45378 269 aaPredicted RBP27.87■■■□□ 2.05
TARBP1-201ENST00000040877 KIF14Q15058 1648 aa27.87■■■□□ 2.05
TARBP1-201ENST00000040877 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
TARBP1-201ENST00000040877 PDZRN3Q9UPQ7 1066 aa27.86■■■□□ 2.05
TARBP1-201ENST00000040877 KCNH5Q8NCM2 988 aa27.85■■■□□ 2.05
TARBP1-201ENST00000040877 TSR2Q969E8 191 aaKnown RBP27.85■■■□□ 2.05
TARBP1-201ENST00000040877 GNL3LQ9NVN8 582 aaKnown RBP27.85■■■□□ 2.05
TARBP1-201ENST00000040877 PDCP20941 246 aa27.85■■■□□ 2.05
TARBP1-201ENST00000040877 ANO8Q9HCE9 1232 aaPredicted RBP27.85■■■□□ 2.05
TARBP1-201ENST00000040877 ATF7IPQ6VMQ6 1270 aa27.85■■■□□ 2.05
TARBP1-201ENST00000040877 PCF11O94913 1555 aaKnown RBP27.85■■■□□ 2.05
TARBP1-201ENST00000040877 CCDC158Q5M9N0 1113 aa27.85■■■□□ 2.05
TARBP1-201ENST00000040877 CCDC43Q96MW1 224 aaKnown RBP27.85■■■□□ 2.05
TARBP1-201ENST00000040877 SLC3A2P08195 630 aaKnown RBP27.84■■■□□ 2.05
TARBP1-201ENST00000040877 PCMTD1Q96MG8 357 aaPredicted RBP27.84■■■□□ 2.05
TARBP1-201ENST00000040877 RABEP1Q15276 862 aa27.84■■■□□ 2.05
TARBP1-201ENST00000040877 HMGB2P26583 209 aaKnown RBP27.84■■■□□ 2.05
TARBP1-201ENST00000040877 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
TARBP1-201ENST00000040877 NUDT16Q96DE0 195 aaKnown RBP27.83■■■□□ 2.05
TARBP1-201ENST00000040877 ADGRL1O94910 1474 aa27.82■■■□□ 2.04
TARBP1-201ENST00000040877 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.81■■■□□ 2.048e-7■■■■□ 26.5
TARBP1-201ENST00000040877 DNAJC2Q99543 621 aaKnown RBP27.81■■■□□ 2.04
TARBP1-201ENST00000040877 NSD3Q9BZ95 1437 aa27.8■■■□□ 2.04
TARBP1-201ENST00000040877 CNNM1Q9NRU3 951 aa27.8■■■□□ 2.04
TARBP1-201ENST00000040877 LRRCC1Q9C099 1032 aa27.8■■■□□ 2.04
TARBP1-201ENST00000040877 NFE2L2Q16236 605 aa27.79■■■□□ 2.04
TARBP1-201ENST00000040877 MVPQ14764 893 aaKnown RBP27.78■■■□□ 2.04
TARBP1-201ENST00000040877 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
TARBP1-201ENST00000040877 ABCC5O15440 1437 aa27.78■■■□□ 2.04
TARBP1-201ENST00000040877 NAT10Q9H0A0 1025 aaKnown RBP27.78■■■□□ 2.04
TARBP1-201ENST00000040877 PLB1Q6P1J6 1458 aa27.78■■■□□ 2.04
TARBP1-201ENST00000040877 FYB1O15117 783 aa27.77■■■□□ 2.04
TARBP1-201ENST00000040877 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
TARBP1-201ENST00000040877 PPP6R1Q9UPN7 881 aa27.77■■■□□ 2.04
TARBP1-201ENST00000040877 TTC39AQ5SRH9 613 aa27.77■■■□□ 2.04
TARBP1-201ENST00000040877 AKNAQ7Z591 1439 aa27.77■■■□□ 2.04
TARBP1-201ENST00000040877 BCAR3O75815 825 aa27.76■■■□□ 2.03
TARBP1-201ENST00000040877 PDE4CQ08493 712 aa27.76■■■□□ 2.03
TARBP1-201ENST00000040877 GPS2Q13227 327 aa27.76■■■□□ 2.03
TARBP1-201ENST00000040877 NEK4P51957 841 aa27.75■■■□□ 2.03
TARBP1-201ENST00000040877 DDX54Q8TDD1 881 aaKnown RBP27.75■■■□□ 2.03
TARBP1-201ENST00000040877 MBD3O95983 291 aa27.74■■■□□ 2.03
TARBP1-201ENST00000040877 FAM177BA6PVY3 158 aa27.74■■■□□ 2.03
TARBP1-201ENST00000040877 LETM1O95202 739 aaPredicted RBP27.73■■■□□ 2.03
TARBP1-201ENST00000040877 CWC22Q9HCG8 908 aaKnown RBP27.73■■■□□ 2.03
TARBP1-201ENST00000040877 C1orf115Q9H7X2 142 aa27.73■■■□□ 2.03
TARBP1-201ENST00000040877 RRS1Q15050 365 aaKnown RBP27.73■■■□□ 2.03
TARBP1-201ENST00000040877 CCAR2Q8N163 923 aaKnown RBP27.73■■■□□ 2.03
TARBP1-201ENST00000040877 ZSCAN25Q6NSZ9 544 aa27.72■■■□□ 2.03
TARBP1-201ENST00000040877 ANKRD1Q15327 319 aa27.72■■■□□ 2.03
TARBP1-201ENST00000040877 OLFM4Q6UX06 510 aa27.72■■■□□ 2.03
TARBP1-201ENST00000040877 RPAP2Q8IXW5 612 aaPredicted RBP27.72■■■□□ 2.03
TARBP1-201ENST00000040877 NACAP1Q9BZK3 213 aa27.72■■■□□ 2.03
TARBP1-201ENST00000040877 BTBD11A6QL63 1104 aa27.71■■■□□ 2.03
TARBP1-201ENST00000040877 SDF4Q9BRK5 362 aa27.71■■■□□ 2.03
TARBP1-201ENST00000040877 GNAT3A8MTJ3 354 aa27.71■■■□□ 2.03
TARBP1-201ENST00000040877 ABCC11Q96J66 1382 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms