RNA–Protein interactions for RNA: ENSMUST00000211235.1

Nup98-206, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 5 BASIC

Gene Nup98, Length 3,748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-206ENSMUST00000211235 Hecw2Q6I6G8 1578 aa17.23■□□□□ 0.35
Nup98-206ENSMUST00000211235 Brd1E9PZ26 1189 aaKnown RBP17.22■□□□□ 0.35
Nup98-206ENSMUST00000211235 Rrp9Q91WM3 475 aaKnown RBP17.22■□□□□ 0.35
Nup98-206ENSMUST00000211235 Rbm25B2RY56 838 aaKnown RBP17.21■□□□□ 0.35
Nup98-206ENSMUST00000211235 Ccdc60Q8C4J0 545 aa17.21■□□□□ 0.35
Nup98-206ENSMUST00000211235 Znf518aB2RRF6 1478 aaKnown RBP17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 Prex1Q69ZK0 1650 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 Kiaa0556Q8C753 1610 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 Chd1P40201 1711 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 Plcb2A3KGF7 1181 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 MaddQ80U28 1577 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 PalldQ9ET54 1408 aa17.2■□□□□ 0.34
Nup98-206ENSMUST00000211235 Ehbp1l1Q99MS7 1716 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Ino80Q6ZPV2 1559 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Hs1bp3Q3TC93 395 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 SkilQ60665 675 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Ankrd50F7BE84 1390 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Ttc21aQ8C0S4 1314 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Nectin2P32507 530 aa17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Ncbp3Q8BZR9 615 aaKnown RBP17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Rtn4Q99P72 1162 aaKnown RBP17.19■□□□□ 0.34
Nup98-206ENSMUST00000211235 Tfip11Q9ERA6 838 aaKnown RBP17.18■□□□□ 0.34
Nup98-206ENSMUST00000211235 Gm10093D3YYI8 482 aa17.18■□□□□ 0.34
Nup98-206ENSMUST00000211235 Hdac1O09106 482 aaKnown RBP17.18■□□□□ 0.34
Nup98-206ENSMUST00000211235 Med14A2ABV5 1459 aaKnown RBP17.17■□□□□ 0.34
Nup98-206ENSMUST00000211235 Map7O88735 730 aa17.17■□□□□ 0.34
Nup98-206ENSMUST00000211235 Skint5A7XUY5 1461 aa17.17■□□□□ 0.34
Nup98-206ENSMUST00000211235 Lrrc7Q80TE7 1490 aa17.16■□□□□ 0.34
Nup98-206ENSMUST00000211235 Lemd3Q9WU40 921 aa17.16■□□□□ 0.34
Nup98-206ENSMUST00000211235 Nrxn1Q9CS84 1514 aa17.15■□□□□ 0.34
Nup98-206ENSMUST00000211235 Senp3Q9EP97 568 aaKnown RBP17.14■□□□□ 0.34
Nup98-206ENSMUST00000211235 FanciQ8K368 1330 aa17.14■□□□□ 0.33
Nup98-206ENSMUST00000211235 Arid3cA6PWV5 409 aa17.13■□□□□ 0.33
Nup98-206ENSMUST00000211235 SlkO54988 1233 aa17.13■□□□□ 0.33
Nup98-206ENSMUST00000211235 G3bp1P97855 465 aaKnown RBP17.13■□□□□ 0.33
Nup98-206ENSMUST00000211235 Cavin4A2AMM0 362 aa17.13■□□□□ 0.33
Nup98-206ENSMUST00000211235 Pik3r4Q8VD65 1358 aa17.13■□□□□ 0.33
Nup98-206ENSMUST00000211235 Q4VA45 678 aa17.12■□□□□ 0.33
Nup98-206ENSMUST00000211235 Stk26Q99JT2 416 aa17.12■□□□□ 0.33
Nup98-206ENSMUST00000211235 Tmco5bQ80X59 307 aa17.12■□□□□ 0.33
Nup98-206ENSMUST00000211235 Tbc1d9Q3UYK3 1264 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 GorabQ8BRM2 368 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 CenpjQ569L8 1344 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 Wdr63B2RY71 923 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 Exosc9Q9JHI7 438 aaKnown RBP17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 Q3UPC7 1272 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 IqubQ8CDK3 788 aa17.11■□□□□ 0.33
Nup98-206ENSMUST00000211235 Ift172Q6VH22 1749 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 Topbp1Q6ZQF0 1515 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 Naip7Q9JIB3 1402 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 Slc12a5Q91V14 1138 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 DmtnQ9WV69 405 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 Plekhm2Q80TQ5 1018 aa17.1■□□□□ 0.33
Nup98-206ENSMUST00000211235 Igf1rQ60751 1373 aa17.09■□□□□ 0.33
Nup98-206ENSMUST00000211235 Rsph3aQ3UFY4 516 aa17.09■□□□□ 0.33
Nup98-206ENSMUST00000211235 Uhrf1bp1B2KF50 1429 aa17.09■□□□□ 0.33
Nup98-206ENSMUST00000211235 KnstrnQ9D9Z1 312 aaKnown RBP17.08■□□□□ 0.32
Nup98-206ENSMUST00000211235 Eif2ak4Q9QZ05 1648 aa17.08■□□□□ 0.32
Nup98-206ENSMUST00000211235 Plxnc1Q9QZC2 1574 aa17.08■□□□□ 0.32
Nup98-206ENSMUST00000211235 Tecpr2Q3UH45 1423 aa17.08■□□□□ 0.32
Nup98-206ENSMUST00000211235 Nsd3Q6P2L6 1439 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 DekQ7TNV0 380 aaKnown RBP17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 PogkQ80TC5 607 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Nek4Q9Z1J2 792 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Taok2Q6ZQ29 1240 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Cdc42bpgQ80UW5 1551 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Cfap65Q3V0B4 1847 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Vamp4O70480 141 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Kdm4cQ8VCD7 1054 aa17.07■□□□□ 0.32
Nup98-206ENSMUST00000211235 Ccdc171E9Q1U1 1324 aa17.06■□□□□ 0.32
Nup98-206ENSMUST00000211235 Bloc1s4Q8VED2 215 aa17.06■□□□□ 0.32
Nup98-206ENSMUST00000211235 PalmQ9Z0P4 383 aa17.06■□□□□ 0.32
Nup98-206ENSMUST00000211235 Aldh1l1Q8R0Y6 902 aa17.06■□□□□ 0.32
Nup98-206ENSMUST00000211235 Prdm2A2A7B5 1709 aaKnown RBP17.06■□□□□ 0.32
Nup98-206ENSMUST00000211235 LifrP42703 1092 aa17.05■□□□□ 0.32
Nup98-206ENSMUST00000211235 Stk11ipQ3TAA7 1072 aa17.05■□□□□ 0.32
Nup98-206ENSMUST00000211235 EngaseQ8BX80 734 aa17.05■□□□□ 0.32
Nup98-206ENSMUST00000211235 Slc52a2Q9D8F3 450 aa17.05■□□□□ 0.32
Nup98-206ENSMUST00000211235 Ncapd2Q8K2Z4 1392 aa17.05■□□□□ 0.32
Nup98-206ENSMUST00000211235 MvpQ9EQK5 861 aa17.04■□□□□ 0.32
Nup98-206ENSMUST00000211235 NinlQ6ZQ12 1394 aa17.04■□□□□ 0.32
Nup98-206ENSMUST00000211235 Vsig10D3YX43 558 aa17.04■□□□□ 0.32
Nup98-206ENSMUST00000211235 NgefQ8CHT1 710 aa17.04■□□□□ 0.32
Nup98-206ENSMUST00000211235 Swt1Q9DBQ9 907 aa17.04■□□□□ 0.32
Nup98-206ENSMUST00000211235 Dhx16G3X8X0 1044 aaKnown RBP17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 CarsQ9ER72 831 aaKnown RBP17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 Ankrd44B2RXR6 993 aa17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 Wwc1Q5SXA9 1104 aa17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 PaskQ8CEE6 1383 aa17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 Ythdc2B2RR83 1445 aaKnown RBP17.03■□□□□ 0.32
Nup98-206ENSMUST00000211235 Depdc5P61460 1591 aa17.02■□□□□ 0.32
Nup98-206ENSMUST00000211235 Tmx3Q8BXZ1 456 aa17.02■□□□□ 0.32
Nup98-206ENSMUST00000211235 Cdc37l1Q9CZP7 335 aa17.02■□□□□ 0.32
Nup98-206ENSMUST00000211235 Cep170bQ80U49 1574 aa17.02■□□□□ 0.31
Nup98-206ENSMUST00000211235 Trim27Q62158 513 aa17.02■□□□□ 0.31
Nup98-206ENSMUST00000211235 Isy1Q69ZQ2 285 aaKnown RBP17.02■□□□□ 0.31
Nup98-206ENSMUST00000211235 Ciz1Q8VEH2 845 aa17.02■□□□□ 0.31
Nup98-206ENSMUST00000211235 Ptch1Q61115 1434 aa17.02■□□□□ 0.31
Nup98-206ENSMUST00000211235 Bag4Q8CI61 457 aa17.01■□□□□ 0.31
Nup98-206ENSMUST00000211235 Mroh1E0CZ22 1640 aa17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms