RNA–Protein interactions for RNA: ENSMUST00000197407.4

Nub1-202, Transcript of NEDD8 ultimate buster 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nub1, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1-202ENSMUST00000197407 Ssh2Q5SW75 1423 aa15.47■□□□□ 0.07
Nub1-202ENSMUST00000197407 Fam135bQ9DAI6 1403 aa15.47■□□□□ 0.07
Nub1-202ENSMUST00000197407 Anp32cQ64G17 123 aa15.46■□□□□ 0.07
Nub1-202ENSMUST00000197407 Uspl1Q3ULM6 1089 aa15.46■□□□□ 0.07
Nub1-202ENSMUST00000197407 Rbm27Q5SFM8 1060 aaKnown RBP15.46■□□□□ 0.07
Nub1-202ENSMUST00000197407 Ercc6lQ8BHK9 1240 aa15.46■□□□□ 0.07
Nub1-202ENSMUST00000197407 Kdm4aQ8BW72 1064 aa15.46■□□□□ 0.07
Nub1-202ENSMUST00000197407 Gcc2Q8CHG3 1679 aa15.45■□□□□ 0.06
Nub1-202ENSMUST00000197407 Casc1Q6TDU8 730 aa15.45■□□□□ 0.06
Nub1-202ENSMUST00000197407 Atp2b3Q0VF55 1220 aa15.45■□□□□ 0.06
Nub1-202ENSMUST00000197407 Kdm5cP41230 1554 aa15.45■□□□□ 0.06
Nub1-202ENSMUST00000197407 SphkapQ6NSW3 1687 aa15.44■□□□□ 0.06
Nub1-202ENSMUST00000197407 Cald1E9QA15 768 aaKnown RBP15.44■□□□□ 0.06
Nub1-202ENSMUST00000197407 Atp7aQ64430 1491 aa15.44■□□□□ 0.06
Nub1-202ENSMUST00000197407 Sass6Q80UK7 654 aa15.44■□□□□ 0.06
Nub1-202ENSMUST00000197407 Irx4Q9QY61 515 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Dync1i1O88485 628 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Fez2Q6TYB5 348 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Serpina10Q8R121 448 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Dmrtc1Q9D9R7 182 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Arhgef11Q68FM7 1552 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Ppp1r18Q8BQ30 594 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Olfml1Q8BSH2 233 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Fancd2Q80V62 1450 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Abca16E9PWJ7 1678 aa15.43■□□□□ 0.06
Nub1-202ENSMUST00000197407 Usp19Q3UJD6 1360 aa15.42■□□□□ 0.06
Nub1-202ENSMUST00000197407 Ptgs1P22437 602 aa15.42■□□□□ 0.06
Nub1-202ENSMUST00000197407 EzrP26040 586 aaKnown RBP15.42■□□□□ 0.06
Nub1-202ENSMUST00000197407 Nek4Q9Z1J2 792 aa15.42■□□□□ 0.06
Nub1-202ENSMUST00000197407 Hvcn1Q3U2S8 269 aa15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 Plin1Q8CGN5 517 aa15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 Znf330Q922H9 316 aa15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 Atxn3Q9CVD2 355 aa15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 U2af2P26369 475 aaKnown RBP15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 Tbc1d31Q6NXY1 996 aa15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 U2af1Q9D883 239 aaKnown RBP15.41■□□□□ 0.06
Nub1-202ENSMUST00000197407 Caskin1Q6P9K8 1431 aa15.4■□□□□ 0.06
Nub1-202ENSMUST00000197407 Atp10dQ8K2X1 1416 aa15.4■□□□□ 0.06
Nub1-202ENSMUST00000197407 Sh3bp1P55194 680 aa15.4■□□□□ 0.06
Nub1-202ENSMUST00000197407 Ncbp1Q3UYV9 790 aaKnown RBP15.4■□□□□ 0.06
Nub1-202ENSMUST00000197407 Cetn4Q8K4K1 168 aa15.4■□□□□ 0.06
Nub1-202ENSMUST00000197407 Puf60Q3UEB3 564 aaKnown RBP15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Taf3Q5HZG4 932 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 AU019823E9PUQ3 292 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Chd1lQ9CXF7 900 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Chmp4cQ9D7F7 232 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Abcc2Q8VI47 1543 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 ErbinQ80TH2 1402 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Ccdc146E9Q9F7 977 aa15.39■□□□□ 0.05
Nub1-202ENSMUST00000197407 Stk11ipQ3TAA7 1072 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Nsd2Q8BVE8 1365 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Gm9992B2RWK3 458 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 RdxP26043 583 aaKnown RBP15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 AcrbpQ3V140 540 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Bms1Q6PGF5 1284 aaKnown RBP15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Unc93aQ710D3 458 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Sox12Q04890 314 aa15.38■□□□□ 0.05
Nub1-202ENSMUST00000197407 Brd1E9PZ26 1189 aaKnown RBP15.37■□□□□ 0.05
Nub1-202ENSMUST00000197407 Rbm42Q91V81 474 aaKnown RBP15.37■□□□□ 0.05
Nub1-202ENSMUST00000197407 Fam184aE9PW83 1143 aa15.37■□□□□ 0.05
Nub1-202ENSMUST00000197407 Tbc1d9Q3UYK3 1264 aa15.37■□□□□ 0.05
Nub1-202ENSMUST00000197407 Bach2P97303 839 aa15.36■□□□□ 0.05
Nub1-202ENSMUST00000197407 Map4k4P97820 1233 aaKnown RBP15.36■□□□□ 0.05
Nub1-202ENSMUST00000197407 Sbno1Q689Z5 1390 aa15.36■□□□□ 0.05
Nub1-202ENSMUST00000197407 KdrP35918 1367 aa15.35■□□□□ 0.05
Nub1-202ENSMUST00000197407 Kank4Q6P9J5 1016 aa15.35■□□□□ 0.05
Nub1-202ENSMUST00000197407 Pabpn1Q8CCS6 302 aaKnown RBP15.35■□□□□ 0.05
Nub1-202ENSMUST00000197407 Mapkbp1Q6NS57 1503 aa15.35■□□□□ 0.05
Nub1-202ENSMUST00000197407 Tpd52l1O54818 204 aa15.34■□□□□ 0.05
Nub1-202ENSMUST00000197407 GsdmaQ9EST1 446 aa15.34■□□□□ 0.05
Nub1-202ENSMUST00000197407 Lrriq1Q0P5X1 1673 aa15.34■□□□□ 0.05
Nub1-202ENSMUST00000197407 Setd1aE9PYH6 1716 aa15.34■□□□□ 0.05
Nub1-202ENSMUST00000197407 Zranb1Q7M760 708 aa15.33■□□□□ 0.05
Nub1-202ENSMUST00000197407 Shq1Q7TMX5 569 aa15.33■□□□□ 0.05
Nub1-202ENSMUST00000197407 Gm16486A0A1D5RMD1 1434 aa15.33■□□□□ 0.04
Nub1-202ENSMUST00000197407 Ttc21bQ0HA38 1315 aa15.33■□□□□ 0.04
Nub1-202ENSMUST00000197407 Wdr63B2RY71 923 aa15.33■□□□□ 0.04
Nub1-202ENSMUST00000197407 Cdkn1cP49919 348 aa15.33■□□□□ 0.04
Nub1-202ENSMUST00000197407 Gtpbp6Q3U6U5 514 aa15.33■□□□□ 0.04
Nub1-202ENSMUST00000197407 Kiaa1551Q5DTW7 1521 aa15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Pcmtd1P59913 357 aa15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Wwc1Q5SXA9 1104 aa15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Nucb2P81117 420 aa15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Adcy5P84309 1262 aa15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Utp14aQ640M1 767 aaKnown RBP15.32■□□□□ 0.04
Nub1-202ENSMUST00000197407 Birc3O08863 600 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 BbxQ8VBW5 907 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Cspp1B2RX88 1205 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Apaf1O88879 1249 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Myom2Q14BI5 1463 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Gadd45bP22339 160 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Ppip5k2Q6ZQB6 1129 aa15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Maco1Q7TQE6 664 aaKnown RBP15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Utp3Q9JI13 469 aaKnown RBP15.31■□□□□ 0.04
Nub1-202ENSMUST00000197407 Tpm3P21107 285 aaKnown RBP15.3■□□□□ 0.04
Nub1-202ENSMUST00000197407 Aplp1Q03157 653 aa15.3■□□□□ 0.04
Nub1-202ENSMUST00000197407 Rrbp1Q99PL5 1605 aaKnown RBP15.3■□□□□ 0.04
Nub1-202ENSMUST00000197407 Ythdc2B2RR83 1445 aaKnown RBP15.3■□□□□ 0.04
Nub1-202ENSMUST00000197407 Cgnl1Q6AW69 1298 aa15.3■□□□□ 0.04
Nub1-202ENSMUST00000197407 Ppp1r3fQ9JIG4 799 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms