RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Polr3dQ91WD1 398 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 HypkQ9CR41 129 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Flad1Q8R123 492 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Riok3Q9DBU3 519 aaKnown RBP15.1■□□□□ 0.01
Fn1-211ENSMUST00000187938 Ylpm1Q9R0I7 1386 aaKnown RBP15.1■□□□□ 0.01
Fn1-211ENSMUST00000187938 Dennd6aQ8BH65 605 aa15.1■□□□□ 0.01
Fn1-211ENSMUST00000187938 GphnQ8BUV3 769 aaKnown RBP15.1■□□□□ 0.01
Fn1-211ENSMUST00000187938 Cep131Q62036 1060 aa15.1■□□□□ 0.01
Fn1-211ENSMUST00000187938 Epb41l2O70318 988 aaKnown RBP15.09■□□□□ 0.01
Fn1-211ENSMUST00000187938 Def6Q8C2K1 630 aa15.09■□□□□ 0.01
Fn1-211ENSMUST00000187938 Mipol1Q9D9F8 279 aa15.09■□□□□ 0.01
Fn1-211ENSMUST00000187938 Stim1P70302 685 aa15.08■□□□□ 0.01
Fn1-211ENSMUST00000187938 Psma5Q9Z2U1 241 aaKnown RBP15.08■□□□□ 0.01
Fn1-211ENSMUST00000187938 Rsph3aQ3UFY4 516 aa15.08■□□□□ 0.01
Fn1-211ENSMUST00000187938 Sept11Q8C1B7 431 aaKnown RBP15.08■□□□□ 0.01
Fn1-211ENSMUST00000187938 Cux2P70298 1426 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Pnmal2G3X9N3 661 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Dusp9Q7TNL7 452 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Usp48Q3V0C5 1052 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Kiaa0753Q6A000 959 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Rai14Q9EP71 979 aaKnown RBP15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Ankrd13dQ6PD24 605 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Znf18Q810A1 556 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Hs6st3Q9QYK4 470 aa15.08■□□□□ 0
Fn1-211ENSMUST00000187938 Cetn1P41209 172 aa15.07■□□□□ 0
Fn1-211ENSMUST00000187938 SfswapQ3USH5 945 aaKnown RBP15.07■□□□□ 0
Fn1-211ENSMUST00000187938 Tom1O88746 492 aa15.07■□□□□ 0
Fn1-211ENSMUST00000187938 Smarcad1Q04692 1021 aa15.07■□□□□ 0
Fn1-211ENSMUST00000187938 Ddx23D3Z0M9 819 aaKnown RBP15.07■□□□□ 0
Fn1-211ENSMUST00000187938 Cul5Q9D5V5 780 aa15.07■□□□□ 0
Fn1-211ENSMUST00000187938 Nol8Q3UHX0 1147 aaKnown RBP15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Jph4Q80WT0 628 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Casq1O09165 405 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Pank3Q8R2W9 370 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Luc7lQ9CYI4 371 aaKnown RBP15.06■□□□□ 0
Fn1-211ENSMUST00000187938 SelenooQ9DBC0 667 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Ctage5Q8R311 779 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Ipo4Q8VI75 1082 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Stxbp4Q9WV89 557 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Fermt2Q8CIB5 680 aa15.06■□□□□ 0
Fn1-211ENSMUST00000187938 Taf12Q8VE65 161 aa15.05■□□□□ 0
Fn1-211ENSMUST00000187938 Spata24Q6P926 205 aa15.05■□□□□ 0
Fn1-211ENSMUST00000187938 Fam50bQ9WTJ8 334 aa15.05■□□□□ 0
Fn1-211ENSMUST00000187938 Tango6Q8C3S2 1079 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 IbspQ61711 324 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 FanciQ8K368 1330 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 Ppp1r1bQ60829 194 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 Ano8Q6PB70 1060 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 Znf287Q9EQB9 759 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 Nap1l5Q9JJF0 156 aa15.05■□□□□ -0
Fn1-211ENSMUST00000187938 Plekhg2Q6KAU7 1340 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 Pip4k2aO70172 405 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 Snx25Q3ZT31 840 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 Cacna2d4Q5RJF7 1116 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 VgfQ0VGU4 617 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 Prkag2Q91WG5 566 aa15.04■□□□□ -0
Fn1-211ENSMUST00000187938 Podxl2Q8CAE9 603 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Atp2b2Q9R0K7 1198 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Gnai1B2RSH2 354 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Ercc6lQ8BHK9 1240 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Gnai3Q9DC51 354 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Sh3d21Q7TSG5 549 aa15.03■□□□□ -0
Fn1-211ENSMUST00000187938 Zscan20B2KFW1 1030 aa15.02■□□□□ -0
Fn1-211ENSMUST00000187938 Cyp26c1B2RXA7 518 aa15.02■□□□□ -0
Fn1-211ENSMUST00000187938 VeztQ3ZK22 780 aa15.02■□□□□ -0
Fn1-211ENSMUST00000187938 Ipo9Q91YE6 1041 aa15.02□□□□□ -0.01
Fn1-211ENSMUST00000187938 Babam1Q3UI43 333 aa15.02□□□□□ -0.01
Fn1-211ENSMUST00000187938 Tmx4Q8C0L0 335 aa15.02□□□□□ -0.01
Fn1-211ENSMUST00000187938 Dnajc2P54103 621 aaKnown RBP15.02□□□□□ -0.01
Fn1-211ENSMUST00000187938 Rab3il1Q8VDV3 383 aa15.01□□□□□ -0.01
Fn1-211ENSMUST00000187938 Glipr1l2Q9CQ35 332 aa15.01□□□□□ -0.01
Fn1-211ENSMUST00000187938 Cchcr1Q8K2I2 770 aa15.01□□□□□ -0.01
Fn1-211ENSMUST00000187938 MpripP97434 1024 aa15.01□□□□□ -0.01
Fn1-211ENSMUST00000187938 Cetn2Q9R1K9 172 aa15.01□□□□□ -0.01
Fn1-211ENSMUST00000187938 Pus7B7ZNL8 666 aaKnown RBP15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Rbm26Q6NZN0 1012 aaKnown RBP15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Dixdc1Q80Y83 711 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Ubxn4Q8VCH8 506 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 DesP31001 469 aaKnown RBP15□□□□□ -0.01
Fn1-211ENSMUST00000187938 StambpQ9CQ26 424 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Hmgn5Q9JL35 406 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Jdp2P97875 163 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Ankib1Q6ZPS6 1085 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Rnf214Q8BFU3 668 aaKnown RBP15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Serpina10Q8R121 448 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Fez1Q8K0X8 392 aa15□□□□□ -0.01
Fn1-211ENSMUST00000187938 Nsfl1cQ9CZ44 370 aaKnown RBP14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Q9D2X8 372 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Fam71e1A1L3C1 212 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Rrp12Q6P5B0 1295 aaKnown RBP14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 St5Q924W7 1134 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Pdcd6ipQ9WU78 869 aaKnown RBP14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 PrkcshO08795 521 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Arhgap35Q91YM2 1499 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 ItpripQ3TNL8 555 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Taf3Q5HZG4 932 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Ccar2Q8VDP4 922 aaKnown RBP14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 PsapQ61207 557 aaKnown RBP14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Kif20aP97329 887 aa14.99□□□□□ -0.01
Fn1-211ENSMUST00000187938 Speer3W4VSP1 261 aa14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms