RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Adamtsl1Q8BLI0 1745 aa11.88□□□□□ -0.51
Trim40-203ENSMUST00000172711 Cadps2Q8BYR5 1297 aa11.87□□□□□ -0.51
Trim40-203ENSMUST00000172711 Os9Q8K2C7 672 aa11.87□□□□□ -0.51
Trim40-203ENSMUST00000172711 Mink1Q9JM52 1308 aa11.87□□□□□ -0.51
Trim40-203ENSMUST00000172711 Taok2Q6ZQ29 1240 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Sugp2Q8CH09 1067 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Txnrd1Q9JMH6 613 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Atp2b2Q9R0K7 1198 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Rgl3Q3UYI5 709 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Znf316Q6PGE4 1016 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Sirt1Q923E4 737 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Nrxn1Q9CS84 1514 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Nfat5Q9WV30 1534 aa11.86□□□□□ -0.51
Trim40-203ENSMUST00000172711 Cacna1sQ02789 1880 aa11.85□□□□□ -0.51
Trim40-203ENSMUST00000172711 Ly75Q60767 1723 aa11.85□□□□□ -0.51
Trim40-203ENSMUST00000172711 Col16a1Q8BLX7 1580 aa11.85□□□□□ -0.51
Trim40-203ENSMUST00000172711 Dixdc1Q80Y83 711 aa11.85□□□□□ -0.51
Trim40-203ENSMUST00000172711 Ms4a5Q810P8 197 aa11.85□□□□□ -0.51
Trim40-203ENSMUST00000172711 Cdhr2E9Q7P9 1308 aa11.84□□□□□ -0.51
Trim40-203ENSMUST00000172711 Tnrc6bQ8BKI2 1810 aaKnown RBP11.84□□□□□ -0.51
Trim40-203ENSMUST00000172711 Ubap1lG3UW59 384 aa11.84□□□□□ -0.51
Trim40-203ENSMUST00000172711 Grwd1Q810D6 446 aaKnown RBP11.84□□□□□ -0.51
Trim40-203ENSMUST00000172711 RalgapbQ8BQZ4 1484 aa11.83□□□□□ -0.52
Trim40-203ENSMUST00000172711 Gm20521D3Z5F7 333 aa11.83□□□□□ -0.52
Trim40-203ENSMUST00000172711 Arid3aQ62431 601 aa11.83□□□□□ -0.52
Trim40-203ENSMUST00000172711 Mast2Q60592 1734 aa11.83□□□□□ -0.52
Trim40-203ENSMUST00000172711 Sf3b2Q3UJB0 878 aaKnown RBP11.82□□□□□ -0.52
Trim40-203ENSMUST00000172711 Mon2Q80TL7 1715 aa11.82□□□□□ -0.52
Trim40-203ENSMUST00000172711 Fer1l6E0CZ42 1862 aa11.82□□□□□ -0.52
Trim40-203ENSMUST00000172711 Kiaa0319Q5SZV5 1081 aa11.81□□□□□ -0.52
Trim40-203ENSMUST00000172711 Ap3b2Q9JME5 1082 aa11.81□□□□□ -0.52
Trim40-203ENSMUST00000172711 Zmym3Q9JLM4 1370 aa11.81□□□□□ -0.52
Trim40-203ENSMUST00000172711 Tet3Q8BG87 1668 aa11.81□□□□□ -0.52
Trim40-203ENSMUST00000172711 Ccdc129Q14B48 1034 aa11.81□□□□□ -0.52
Trim40-203ENSMUST00000172711 NktrP30415 1453 aa11.8□□□□□ -0.52
Trim40-203ENSMUST00000172711 Pola1P33609 1465 aa11.8□□□□□ -0.52
Trim40-203ENSMUST00000172711 Polr3aB2RXC6 1390 aa11.8□□□□□ -0.52
Trim40-203ENSMUST00000172711 Usp47Q8BY87 1376 aa11.8□□□□□ -0.52
Trim40-203ENSMUST00000172711 PaskQ8CEE6 1383 aa11.79□□□□□ -0.52
Trim40-203ENSMUST00000172711 Fyb1O35601 819 aa11.78□□□□□ -0.52
Trim40-203ENSMUST00000172711 Bcl9lQ67FY2 1494 aa11.78□□□□□ -0.52
Trim40-203ENSMUST00000172711 Stag3O70576 1240 aa11.77□□□□□ -0.52
Trim40-203ENSMUST00000172711 Nup153E9Q3G8 1462 aaKnown RBP11.77□□□□□ -0.53
Trim40-203ENSMUST00000172711 Usp40Q8BWR4 1235 aa11.76□□□□□ -0.53
Trim40-203ENSMUST00000172711 CatipB9EKE5 520 aa11.76□□□□□ -0.53
Trim40-203ENSMUST00000172711 G430095P16RikE9Q913 147 aa11.76□□□□□ -0.53
Trim40-203ENSMUST00000172711 Rtl5Q5DTT4 599 aa11.76□□□□□ -0.53
Trim40-203ENSMUST00000172711 Cpsf1Q9EPU4 1441 aaKnown RBP11.75□□□□□ -0.53
Trim40-203ENSMUST00000172711 Dzip1Q8BMD2 852 aa11.75□□□□□ -0.53
Trim40-203ENSMUST00000172711 Cdk19Q8BWD8 501 aa11.75□□□□□ -0.53
Trim40-203ENSMUST00000172711 IqubQ8CDK3 788 aa11.75□□□□□ -0.53
Trim40-203ENSMUST00000172711 OscarQ8VBT3 265 aa11.75□□□□□ -0.53
Trim40-203ENSMUST00000172711 Sbno1Q689Z5 1390 aa11.74□□□□□ -0.53
Trim40-203ENSMUST00000172711 Eid3Q3V124 375 aa11.73□□□□□ -0.53
Trim40-203ENSMUST00000172711 Nid2O88322 1403 aa11.73□□□□□ -0.53
Trim40-203ENSMUST00000172711 Ccer2J3QPU5 274 aa11.72□□□□□ -0.53
Trim40-203ENSMUST00000172711 Kat6bQ8BRB7 1872 aa11.72□□□□□ -0.53
Trim40-203ENSMUST00000172711 Pard3Q99NH2 1333 aa11.71□□□□□ -0.53
Trim40-203ENSMUST00000172711 TimelessQ9R1X4 1197 aa11.71□□□□□ -0.53
Trim40-203ENSMUST00000172711 Mug2P28666 1451 aa11.71□□□□□ -0.54
Trim40-203ENSMUST00000172711 Akap11E9Q777 1895 aa11.7□□□□□ -0.54
Trim40-203ENSMUST00000172711 Gm16486A0A1D5RMD1 1434 aa11.7□□□□□ -0.54
Trim40-203ENSMUST00000172711 Ncapd2Q8K2Z4 1392 aa11.7□□□□□ -0.54
Trim40-203ENSMUST00000172711 Nphp4P59240 1425 aa11.69□□□□□ -0.54
Trim40-203ENSMUST00000172711 ZgpatQ8VDM1 511 aa11.69□□□□□ -0.54
Trim40-203ENSMUST00000172711 Hspa5P20029 655 aaKnown RBP11.68□□□□□ -0.54
Trim40-203ENSMUST00000172711 Taok3Q8BYC6 898 aa11.68□□□□□ -0.54
Trim40-203ENSMUST00000172711 Zbtb4Q5F293 982 aa11.67□□□□□ -0.54
Trim40-203ENSMUST00000172711 Frmpd2A0A140LI67 1392 aa11.67□□□□□ -0.54
Trim40-203ENSMUST00000172711 Gm21698A0A087WQP8 267 aa11.66□□□□□ -0.54
Trim40-203ENSMUST00000172711 Gm21671G3UY31 267 aa11.66□□□□□ -0.54
Trim40-203ENSMUST00000172711 Card11Q8CIS0 1159 aa11.66□□□□□ -0.54
Trim40-203ENSMUST00000172711 Nwd2Q6P5U7 1742 aa11.65□□□□□ -0.54
Trim40-203ENSMUST00000172711 Neurod1Q60867 357 aa11.65□□□□□ -0.55
Trim40-203ENSMUST00000172711 Ezh2Q61188 746 aaKnown RBP11.65□□□□□ -0.55
Trim40-203ENSMUST00000172711 Map3k19E9Q3S4 1311 aa11.64□□□□□ -0.55
Trim40-203ENSMUST00000172711 GakQ99KY4 1305 aa11.64□□□□□ -0.55
Trim40-203ENSMUST00000172711 PsdQ5DTT2 1024 aa11.64□□□□□ -0.55
Trim40-203ENSMUST00000172711 4930523C07RikE9Q2T4 99 aa11.63□□□□□ -0.55
Trim40-203ENSMUST00000172711 HdgfP51859 237 aaKnown RBP11.63□□□□□ -0.55
Trim40-203ENSMUST00000172711 Pm20d1Q8C165 503 aa11.63□□□□□ -0.55
Trim40-203ENSMUST00000172711 Gtf2e1Q9D0D5 440 aa11.63□□□□□ -0.55
Trim40-203ENSMUST00000172711 Gsto1O09131 240 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 Apba2P98084 750 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 Ppp6r1Q7TSI3 856 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 Idi2Q8BFZ6 227 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 Slx1bQ8BX32 270 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 Mdc1Q5PSV9 1707 aa11.62□□□□□ -0.55
Trim40-203ENSMUST00000172711 CenpjQ569L8 1344 aa11.61□□□□□ -0.55
Trim40-203ENSMUST00000172711 Nckap5lQ6GQX2 1323 aa11.61□□□□□ -0.55
Trim40-203ENSMUST00000172711 TonslQ6NZL6 1363 aa11.61□□□□□ -0.55
Trim40-203ENSMUST00000172711 Erbb3Q61526 1339 aa11.59□□□□□ -0.55
Trim40-203ENSMUST00000172711 Lrit1Q8K099 624 aa11.58□□□□□ -0.56
Trim40-203ENSMUST00000172711 Chd4Q6PDQ2 1915 aaKnown RBP11.57□□□□□ -0.56
Trim40-203ENSMUST00000172711 Ncoa4Q5U4H9 625 aa11.57□□□□□ -0.56
Trim40-203ENSMUST00000172711 Card10P58660 1021 aa11.56□□□□□ -0.56
Trim40-203ENSMUST00000172711 RgmbQ7TQ33 436 aa11.56□□□□□ -0.56
Trim40-203ENSMUST00000172711 Gimap6Q8K349 305 aa11.56□□□□□ -0.56
Trim40-203ENSMUST00000172711 Amotl2Q8K371 772 aa11.56□□□□□ -0.56
Trim40-203ENSMUST00000172711 Dnajc10Q9DC23 793 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms