RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Ccdc171E9Q1U1 1324 aa11.94□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Rab11fip3Q8CHD8 1047 aa11.94□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Mcm4P49717 862 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Ccdc43Q9CR29 222 aaKnown RBP11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Psme1P97371 249 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Nutm1Q8BHP2 1126 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Cfap58B2RW38 873 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Kcnh8P59111 1102 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 NexnQ7TPW1 607 aa11.93□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Gse1Q3U3C9 1213 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Q8C5K5 320 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Trim29Q8R2Q0 587 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Dnaaf4Q8R368 420 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Swt1Q9DBQ9 907 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Pmfbp1Q9WVQ0 1022 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Utp14aQ640M1 767 aaKnown RBP11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 MpndQ3TV65 487 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Med4Q9CQA5 270 aa11.92□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Arglu1Q3UL36 271 aaKnown RBP11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Tspyl2Q7TQI8 677 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Q7TT23 1179 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Phldb2Q8K1N2 1249 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Gcc1Q9D4H2 778 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 SelenooQ9DBC0 667 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Trim25Q61510 634 aaKnown RBP11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Cog6Q8R3I3 657 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Q9D9S1 216 aa11.91□□□□□ -0.5
Smchd1-201ENSMUST00000127430 March6Q6ZQ89 909 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Pdcl2Q78Y63 240 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Syce3B5KM66 88 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Map9Q3TRR0 646 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Kiaa0753Q6A000 959 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 MicalclQ9D5U9 680 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Cnnm3Q32NY4 713 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Kif18aQ91WD7 886 aa11.9□□□□□ -0.5
Smchd1-201ENSMUST00000127430 Dhx29Q6PGC1 1365 aaKnown RBP11.9□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Brd2Q7JJ13 798 aaKnown RBP11.9□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Mctp1E9PV86 951 aa11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Smc2Q8CG48 1191 aaKnown RBP11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Taco1Q8K0Z7 294 aaKnown RBP11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Stk38Q91VJ4 465 aa11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Fam107bQ3TGF2 131 aa11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Eif3aP23116 1344 aaKnown RBP11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Me1P06801 572 aa11.89□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Txndc2Q6P902 515 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Exoc8Q6PGF7 716 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Krt85Q9Z2T6 507 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 MyclP10166 368 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Tubb6Q922F4 447 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 HdgfP51859 237 aaKnown RBP11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Sf3a3Q9D554 501 aaKnown RBP11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Sart1Q9Z315 806 aaKnown RBP11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Erich2E9Q1A6 463 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 CenpqQ9CPQ5 267 aa11.88□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Jakmip2D3YXK0 820 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 ImpactO55091 318 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Neurod6P48986 337 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Nup88Q8CEC0 753 aaKnown RBP11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Sytl4Q9R0Q1 673 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Homer1Q9Z2Y3 366 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Naa25Q8BWZ3 972 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Cavin1O54724 392 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Hvcn1Q3U2S8 269 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Erlin2Q8BFZ9 340 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Ppp2r1aQ76MZ3 589 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Cabp4Q8VHC5 271 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Fez2Q6TYB5 348 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Ccp110Q7TSH4 1004 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Stk3Q9JI10 497 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Rcan3Q9JKK0 239 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Kdm5dQ62240 1548 aa11.87□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Rab3gap2Q8BMG7 1366 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Lamb3Q61087 1168 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Igsf3Q6ZQA6 1194 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 CrcpO35427 148 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Pip4k2aO70172 405 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Pde6bP23440 856 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Sv2bQ8BG39 683 aa11.86□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Slu7Q8BHJ9 585 aa11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Vps8Q0P5W1 1427 aa11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Soga3Q6NZL0 945 aa11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Cfdp1O88271 295 aaKnown RBP11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Psmd1Q3TXS7 953 aa11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Samm50Q8BGH2 469 aa11.85□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Tmc1Q8R4P5 757 aa11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 TxlnbQ8VBT1 685 aa11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 SltmQ8CH25 1031 aaKnown RBP11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Eif5P59325 429 aaKnown RBP11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Fam177a1Q8BR63 207 aa11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Jakmip1Q8BVL9 626 aa11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Ap3b2Q9JME5 1082 aa11.84□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Luc7lQ9CYI4 371 aaKnown RBP11.83□□□□□ -0.51
Smchd1-201ENSMUST00000127430 Arid3cA6PWV5 409 aa11.83□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Iqca1lA6H690 825 aa11.83□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Paxbp1P58501 919 aa11.83□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Cavin4A2AMM0 362 aa11.82□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Ppp1r9bQ6R891 817 aaKnown RBP11.82□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Cep57l1Q8VDS7 400 aa11.82□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Gnl2Q99LH1 728 aaKnown RBP11.82□□□□□ -0.52
Smchd1-201ENSMUST00000127430 Nphp1Q9QY53 687 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms