RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Jakmip1Q8BVL9 626 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Kif18aQ91WD7 886 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Gcc1Q9D4H2 778 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Sytl4Q9R0Q1 673 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Fkbp4P30416 458 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Frmd3Q8BHD4 595 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Commd10Q8JZY2 202 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Cabp2Q9JLK4 216 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Shroom4Q1W617 1475 aa18.6■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Washc2Q6PGL7 1334 aa18.59■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Nol8Q3UHX0 1147 aaKnown RBP18.59■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Cep112Q5PR68 954 aa18.59■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Paxip1Q6NZQ4 1056 aa18.59■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Ppp4r3bQ922R5 820 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Cnnm1Q0GA42 951 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 HypkQ9CR41 129 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Cd109Q8R422 1442 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 CastP51125 788 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Zpr1Q62384 459 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Def6Q8C2K1 630 aa18.58■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Mctp1E9PV86 951 aa18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Hap1O35668 628 aa18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Prpf4bQ61136 1007 aaKnown RBP18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Cttnbp2B9EJA2 1648 aa18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Bag1Q60739 355 aa18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Smarca4Q3TKT4 1613 aaKnown RBP18.57■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Lrrcc1Q69ZB0 1026 aa18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Gnl3lQ6PGG6 577 aaKnown RBP18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Gtf2a1Q99PM3 378 aa18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Cwc27Q3TKY6 469 aa18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 TefQ9JLC6 301 aa18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Atad2bE9Q166 1460 aaKnown RBP18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Dusp27Q148W8 1138 aa18.56■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Myom3A2ABU4 1439 aa18.55■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Ccdc102aQ3TMW1 549 aa18.54■□□□□ 0.56
Ubr2-201ENSMUST00000113335 OptnQ8K3K8 584 aa18.54■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Krt85Q9Z2T6 507 aa18.54■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Kiaa0753Q6A000 959 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Washc4Q3UMB9 1173 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Srgap3Q812A2 1099 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 ItpripQ3TNL8 555 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Zranb3Q6NZP1 1069 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Ccar2Q8VDP4 922 aaKnown RBP18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Cep89Q9CZX2 791 aa18.53■□□□□ 0.56
Ubr2-201ENSMUST00000113335 CenphQ9QYM8 241 aa18.52■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Prdm16A2A935 1275 aa18.52■□□□□ 0.56
Ubr2-201ENSMUST00000113335 Samm50Q8BGH2 469 aa18.52■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Tfip11Q9ERA6 838 aaKnown RBP18.52■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Map3k5O35099 1380 aa18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Erich4Q3UNU4 136 aa18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Sel1lQ9Z2G6 790 aa18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Tango6Q8C3S2 1079 aa18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Smg7Q5RJH6 1138 aaKnown RBP18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 CarsQ9ER72 831 aaKnown RBP18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Pmfbp1Q9WVQ0 1022 aa18.51■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Nup88Q8CEC0 753 aaKnown RBP18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Sirt1Q923E4 737 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Cdc37l1Q9CZP7 335 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Trim30cD3YVI9 513 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Eif3aP23116 1344 aaKnown RBP18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 TbcaP48428 108 aaKnown RBP18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Lamb3Q61087 1168 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Secisbp2lQ6A098 1086 aaKnown RBP18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Ccdc96Q9CR92 584 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Naip1Q9QWK5 1403 aa18.5■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Mrvi1Q9WUX5 899 aaKnown RBP18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Syce3B5KM66 88 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Abcd1P48410 736 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Ehmt1Q5DW34 1296 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Nat10Q8K224 1024 aaKnown RBP18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Tubb6Q922F4 447 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Erc1Q99MI1 1120 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Dhx8A2A4P0 1244 aaKnown RBP18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Fsd1Q7TPM6 496 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Slc13a4Q8BZ82 625 aa18.49■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Med4Q9CQA5 270 aa18.48■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Stard3nlQ9DCI3 235 aa18.48■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Dhx9O70133 1380 aaKnown RBP18.48■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Ncapd3Q6ZQK0 1506 aa18.48■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Znf692Q3U381 531 aa18.48■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Eif5P59325 429 aaKnown RBP18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Plekhg5Q66T02 1073 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Top2aQ01320 1528 aaKnown RBP18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Cpa2Q504N0 417 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Ift57Q8BXG3 429 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Themis2Q91YX0 663 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Atf3Q60765 181 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 PsapQ61207 557 aaKnown RBP18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Polr1aO35134 1717 aaKnown RBP18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Pip4k2aO70172 405 aa18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Pdia4P08003 638 aaKnown RBP18.47■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Cep57l1Q8VDS7 400 aa18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Arhgap5P97393 1501 aa18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 CalrP14211 416 aaKnown RBP18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Ggnbp2Q5SV77 696 aa18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Larp1Q6ZQ58 1072 aaKnown RBP18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Rbm5Q91YE7 815 aaKnown RBP18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 ScribQ80U72 1612 aa18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 Top1mtQ8R4U6 593 aa18.46■□□□□ 0.55
Ubr2-201ENSMUST00000113335 MvpQ9EQK5 861 aa18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms