RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 OvosQ3UU35 1456 aa20.21■□□□□ 0.83
Usp47-201ENSMUST00000106653 Polr3aB2RXC6 1390 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 TkfcQ8VC30 578 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Washc2Q6PGL7 1334 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Tpm1P58771 284 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gabpb2P81069 414 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Plekhd1B2RPU2 505 aa20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Ddx54Q8K4L0 874 aaKnown RBP20.2■□□□□ 0.82
Usp47-201ENSMUST00000106653 Ggnbp2Q5SV77 696 aa20.19■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gcc1Q9D4H2 778 aa20.19■□□□□ 0.82
Usp47-201ENSMUST00000106653 Atp10dQ8K2X1 1416 aa20.19■□□□□ 0.82
Usp47-201ENSMUST00000106653 Speer4bQ9D9F7 267 aa20.19■□□□□ 0.82
Usp47-201ENSMUST00000106653 1700010I14RikQ7TPG0 532 aa20.18■□□□□ 0.82
Usp47-201ENSMUST00000106653 Me1P06801 572 aa20.18■□□□□ 0.82
Usp47-201ENSMUST00000106653 Stard3nlQ9DCI3 235 aa20.18■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gpatch3Q8BIY1 525 aa20.17■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gpatch8A2A6A1 1505 aa20.17■□□□□ 0.82
Usp47-201ENSMUST00000106653 Nol12Q8BG17 217 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Usp48Q3V0C5 1052 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 AnlnQ8K298 1121 aaKnown RBP20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 UvssaQ9D479 717 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 AI481877A2ALV5 1481 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Eif3aP23116 1344 aaKnown RBP20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm21663A0A0G2JE01 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm7361D3Z6R1 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 5031410I06RikE9Q4E0 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm1979E9QAN3 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm5862K7N5V5 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm10220K7N660 267 aa20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Tnpo1Q8BFY9 898 aaKnown RBP20.16■□□□□ 0.82
Usp47-201ENSMUST00000106653 Gm1043A0A140LJC2 1431 aa20.15■□□□□ 0.82
Usp47-201ENSMUST00000106653 Cfap99A0A140LIX9 648 aa20.15■□□□□ 0.82
Usp47-201ENSMUST00000106653 Eif4g1Q6NZJ6 1600 aaKnown RBP20.15■□□□□ 0.82
Usp47-201ENSMUST00000106653 Cwc27Q3TKY6 469 aa20.15■□□□□ 0.82
Usp47-201ENSMUST00000106653 Fam135aQ6NS59 1506 aa20.14■□□□□ 0.82
Usp47-201ENSMUST00000106653 Q3UJC8 639 aa20.14■□□□□ 0.81
Usp47-201ENSMUST00000106653 TmpoQ61033 693 aaKnown RBP20.14■□□□□ 0.81
Usp47-201ENSMUST00000106653 Stk11ipQ3TAA7 1072 aa20.14■□□□□ 0.81
Usp47-201ENSMUST00000106653 Map4k4P97820 1233 aaKnown RBP20.14■□□□□ 0.81
Usp47-201ENSMUST00000106653 Hnrnpul1Q8VDM6 859 aaKnown RBP20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Fancd2Q80V62 1450 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Gm21680A0A0G2JGR8 267 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Kif3aP28741 701 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Kcnh8P59111 1102 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Srgap3Q812A2 1099 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 4930572O03RikQ8C5Y0 211 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Hook1Q8BIL5 728 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Cog6Q8R3I3 657 aa20.13■□□□□ 0.81
Usp47-201ENSMUST00000106653 Ppp1r15aP17564 657 aa20.12■□□□□ 0.81
Usp47-201ENSMUST00000106653 MvpQ9EQK5 861 aa20.12■□□□□ 0.81
Usp47-201ENSMUST00000106653 DroshaQ5HZJ0 1373 aaKnown RBP20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Btbd11Q6GQW0 1109 aa20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 OptnQ8K3K8 584 aa20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Exoc6bA6H5Z3 810 aa20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Rprd2Q6NXI6 1469 aaKnown RBP20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Kif18aQ91WD7 886 aa20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Sytl4Q9R0Q1 673 aa20.11■□□□□ 0.81
Usp47-201ENSMUST00000106653 Rbm5Q91YE7 815 aaKnown RBP20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Ipo7Q9EPL8 1038 aaKnown RBP20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Hmgn5Q9JL35 406 aa20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Hap1O35668 628 aa20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Thoc2B1AZI6 1594 aaKnown RBP20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Rapgef6Q5NCJ1 1609 aa20.1■□□□□ 0.81
Usp47-201ENSMUST00000106653 Abl1P00520 1123 aa20.09■□□□□ 0.81
Usp47-201ENSMUST00000106653 Gtf3c3Q3TMP1 882 aa20.09■□□□□ 0.81
Usp47-201ENSMUST00000106653 Nol8Q3UHX0 1147 aaKnown RBP20.09■□□□□ 0.81
Usp47-201ENSMUST00000106653 Agtpbp1Q641K1 1218 aa20.09■□□□□ 0.81
Usp47-201ENSMUST00000106653 Ncoa1P70365 1447 aa20.08■□□□□ 0.81
Usp47-201ENSMUST00000106653 Trim29Q8R2Q0 587 aa20.08■□□□□ 0.8
Usp47-201ENSMUST00000106653 Ncoa3O09000 1398 aa20.08■□□□□ 0.8
Usp47-201ENSMUST00000106653 Mapkbp1Q6NS57 1503 aa20.08■□□□□ 0.8
Usp47-201ENSMUST00000106653 Flad1Q8R123 492 aa20.08■□□□□ 0.8
Usp47-201ENSMUST00000106653 Odf2lQ9D478 642 aa20.08■□□□□ 0.8
Usp47-201ENSMUST00000106653 Maco1Q7TQE6 664 aaKnown RBP20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 Q9D9S1 216 aa20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 Sos1Q62245 1319 aa20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 Odf2A3KGV1 830 aaKnown RBP20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 Naip5Q9R016 1403 aa20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 CarsQ9ER72 831 aaKnown RBP20.07■□□□□ 0.8
Usp47-201ENSMUST00000106653 Map3k13Q1HKZ5 959 aa20.06■□□□□ 0.8
Usp47-201ENSMUST00000106653 Pik3c2gO70167 1506 aa20.06■□□□□ 0.8
Usp47-201ENSMUST00000106653 Prl7d1P04769 244 aa20.06■□□□□ 0.8
Usp47-201ENSMUST00000106653 TnikP83510 1323 aa20.05■□□□□ 0.8
Usp47-201ENSMUST00000106653 Ubxn4Q8VCH8 506 aa20.05■□□□□ 0.8
Usp47-201ENSMUST00000106653 Kcnh5Q920E3 988 aa20.05■□□□□ 0.8
Usp47-201ENSMUST00000106653 Gtf2f1Q3THK3 508 aaKnown RBP20.05■□□□□ 0.8
Usp47-201ENSMUST00000106653 ZgpatQ8VDM1 511 aa20.05■□□□□ 0.8
Usp47-201ENSMUST00000106653 Rbm28Q8CGC6 750 aaKnown RBP20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 Gm10563F6WIE4 79 aa20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 BC005561E9Q5E2 1589 aa20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 Ccdc43Q9CR29 222 aaKnown RBP20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 Washc4Q3UMB9 1173 aa20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 Drc7Q6V3W6 876 aa20.04■□□□□ 0.8
Usp47-201ENSMUST00000106653 Zkscan1Q8BGS3 561 aaKnown RBP20.03■□□□□ 0.8
Usp47-201ENSMUST00000106653 Ttc19Q8CC21 365 aa20.03■□□□□ 0.8
Usp47-201ENSMUST00000106653 Ccdc173A0JLY1 547 aa20.03■□□□□ 0.8
Usp47-201ENSMUST00000106653 Jakmip1Q8BVL9 626 aa20.03■□□□□ 0.8
Usp47-201ENSMUST00000106653 Rhot2Q8JZN7 620 aa20.03■□□□□ 0.8
Usp47-201ENSMUST00000106653 L3mbtl2P59178 703 aa20.02■□□□□ 0.8
Usp47-201ENSMUST00000106653 Wdr78E9PYY5 807 aa20.02■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms