RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Q3UJC8 639 aa18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Gapvd1Q6PAR5 1458 aa18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 MpripP97434 1024 aa18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Rec8Q8C5S7 591 aa18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Washc2Q6PGL7 1334 aa18.97■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Phactr2B1AVP0 632 aa18.97■□□□□ 0.63
Clcn3-203ENSMUST00000093490 SkilQ60665 675 aa18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Fam135aQ6NS59 1506 aa18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Zrsr2Q62377 462 aaKnown RBP18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Rrp9Q91WM3 475 aaKnown RBP18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Slc4a2P13808 1237 aaKnown RBP18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Gpatch3Q8BIY1 525 aa18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Flad1Q8R123 492 aa18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Speer4bQ9D9F7 267 aa18.96■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Q9D2X8 372 aa18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Zmym3Q9JLM4 1370 aa18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Lrrcc1Q69ZB0 1026 aa18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Eif3bQ8JZQ9 803 aaKnown RBP18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Cyp46a1Q9WVK8 500 aa18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ftsj3Q9DBE9 838 aaKnown RBP18.95■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ints3Q7TPD0 1041 aaKnown RBP18.94■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ubxn4Q8VCH8 506 aa18.94■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Mical1Q8VDP3 1048 aa18.94■□□□□ 0.62
Clcn3-203ENSMUST00000093490 BcanQ61361 883 aa18.94■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Mapkbp1Q6NS57 1503 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm21680A0A0G2JGR8 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm21663A0A0G2JE01 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm7361D3Z6R1 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 5031410I06RikE9Q4E0 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm1979E9QAN3 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm5862K7N5V5 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gm10220K7N660 267 aa18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 AnlnQ8K298 1121 aaKnown RBP18.93■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Hmox1P14901 289 aa18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Znhit6Q3UFB2 460 aaKnown RBP18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Nek4Q9Z1J2 792 aa18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Bcl2l13P59017 434 aa18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Odf2A3KGV1 830 aaKnown RBP18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Polr3gQ6NXY9 223 aa18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Krt82Q99M74 516 aa18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Psma5Q9Z2U1 241 aaKnown RBP18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Rbm5Q91YE7 815 aaKnown RBP18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 NaspQ99MD9 773 aaKnown RBP18.92■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Cplx1P63040 134 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Dixdc1Q80Y83 711 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Sos1Q62245 1319 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ccp110Q7TSH4 1004 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Zkscan2G3X952 960 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Zfp444Q3TDV8 331 aaKnown RBP18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Polr3aB2RXC6 1390 aa18.91■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Gnai2P08752 355 aaKnown RBP18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Phf14Q9D4H9 881 aa18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ankrd26Q811D2 1581 aa18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Drc7Q6V3W6 876 aa18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Eif4g1Q6NZJ6 1600 aaKnown RBP18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Rapgef4Q9EQZ6 1011 aa18.9■□□□□ 0.62
Clcn3-203ENSMUST00000093490 PogkQ80TC5 607 aa18.89■□□□□ 0.62
Clcn3-203ENSMUST00000093490 Ythdc2B2RR83 1445 aaKnown RBP18.89■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gpatch8A2A6A1 1505 aa18.89■□□□□ 0.61
Clcn3-203ENSMUST00000093490 PdcQ9QW08 244 aa18.89■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Trim34bJ3QNR8 485 aa18.89■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Trim34aQ99PP6 485 aa18.89■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Ppp1r15aP17564 657 aa18.88■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gcom1E9PZ54 550 aa18.88■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Anp32eP97822 260 aaKnown RBP18.88■□□□□ 0.61
Clcn3-203ENSMUST00000093490 MyzapQ3UIJ9 466 aa18.88■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gm156Q58A37 223 aa18.88■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Tnpo1Q8BFY9 898 aaKnown RBP18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Cabp2Q9JLK4 216 aa18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gm1043A0A140LJC2 1431 aa18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Elp1Q7TT37 1333 aaKnown RBP18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Fkbp4P30416 458 aa18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Nectin2P32507 530 aa18.87■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Cdkn1cP49919 348 aa18.86■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Trim29Q8R2Q0 587 aa18.86■□□□□ 0.61
Clcn3-203ENSMUST00000093490 BccipQ9CWI3 316 aa18.86■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Zkscan1Q8BGS3 561 aaKnown RBP18.86■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Mad1l1Q9WTX8 717 aaKnown RBP18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gcc1Q9D4H2 778 aa18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Dhx8A2A4P0 1244 aaKnown RBP18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Dusp9Q7TNL7 452 aa18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 PrkcshO08795 521 aa18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Rhot2Q8JZN7 620 aa18.85■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Q7TT23 1179 aa18.84■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Mapk8ip1Q9WVI9 707 aa18.84■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Cfap99A0A140LIX9 648 aa18.84■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Gm10563F6WIE4 79 aa18.84■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Nphp1Q9QY53 687 aa18.84■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Chmp4cQ9D7F7 232 aa18.83■□□□□ 0.61
Clcn3-203ENSMUST00000093490 Me1P06801 572 aa18.83■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Slc5a4bQ91ZP4 660 aa18.83■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Dusp27Q148W8 1138 aa18.83■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Odf2lQ9D478 642 aa18.83■□□□□ 0.6
Clcn3-203ENSMUST00000093490 PalmQ9Z0P4 383 aa18.83■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Ehmt1Q5DW34 1296 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Fez1Q8K0X8 392 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Pnmal2G3X9N3 661 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Apaf1O88879 1249 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Wdhd1P59328 1117 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Idi2Q8BFZ6 227 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms