RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Efcab5A0JP43 1406 aa19.61■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Cyp26c1B2RXA7 518 aa19.6■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Shq1Q7TMX5 569 aa19.6■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Krt85Q9Z2T6 507 aa19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Mink1Q9JM52 1308 aa19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Ttll13A4Q9F6 804 aa19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Cfdp1O88271 295 aaKnown RBP19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Gnai2P08752 355 aaKnown RBP19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Fam43aQ8BUP8 424 aa19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Rnf214Q8BFU3 668 aaKnown RBP19.59■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 SrrtQ99MR6 875 aaKnown RBP19.58■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 PsapQ61207 557 aaKnown RBP19.58■□□□□ 0.73
Ccdc88a-201ENSMUST00000040182 Map3k1P53349 1493 aa19.58■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Shroom4Q1W617 1475 aa19.58■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Lmbr1Q9JIT0 490 aa19.58■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Plcd4Q8K3R3 807 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Cfap45Q9D9U9 551 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Abcd1P48410 736 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Agtpbp1Q641K1 1218 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 MlecQ6ZQI3 291 aaKnown RBP19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Pank1Q8K4K6 548 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Pmfbp1Q9WVQ0 1022 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Cfap58B2RW38 873 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Cep57l1Q8VDS7 400 aa19.57■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 LarsQ8BMJ2 1178 aa19.56■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ddx46Q569Z5 1032 aaKnown RBP19.56■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Tango6Q8C3S2 1079 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Wasf1Q8R5H6 559 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ecm2Q5FW85 670 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Myom3A2ABU4 1439 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Washc2Q6PGL7 1334 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Soga1E1U8D0 1418 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 NcapgE9PWG6 1004 aa19.55■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Spata24Q6P926 205 aa19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Slc13a4Q8BZ82 625 aa19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Adck5Q80V03 582 aa19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Mphosph10Q810V0 681 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 FosbP13346 338 aa19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ncbp1Q3UYV9 790 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ccar2Q8VDP4 922 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 TefQ9JLC6 301 aa19.54■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 IncenpQ9WU62 880 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Sel1lQ9Z2G6 790 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Tiam1Q60610 1591 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ccdc102aQ3TMW1 549 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Fmnl2A2APV2 1086 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 ItpripQ3TNL8 555 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Mipol1Q9D9F8 279 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Nap1l5Q9JJF0 156 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ccdc181Q80ZU5 509 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Rsph6aQ8CDR2 708 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 TbcaP48428 108 aaKnown RBP19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Eva1cP58659 440 aa19.53■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Prdm16A2A935 1275 aa19.52■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Krt84Q99M73 603 aa19.52■□□□□ 0.72
Ccdc88a-201ENSMUST00000040182 Ncbp3Q8BZR9 615 aaKnown RBP19.52■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Hdgfl1Q2VPR5 283 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Cep131Q62036 1060 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Samd1D3YXK1 519 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Larp1Q6ZQ58 1072 aaKnown RBP19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Cdc45Q9Z1X9 566 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Ppp6r1Q7TSI3 856 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 HypkQ9CR41 129 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Arhgef18Q6P9R4 1021 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Ccdc141E9Q8Q6 1531 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 CastP51125 788 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Prpf4bQ61136 1007 aaKnown RBP19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Stard3nlQ9DCI3 235 aa19.51■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Ppm1fQ8CGA0 452 aa19.5■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Tnpo1Q8BFY9 898 aaKnown RBP19.5■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Cfap53Q9D439 514 aa19.5■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Erlin1Q91X78 346 aa19.5■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Smtnl1Q99LM3 459 aa19.49■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 StambpQ9CQ26 424 aa19.49■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Rpgrip1lQ8CG73 1264 aa19.49■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Arhgef5E9Q7D5 1581 aa19.49■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Gm7361D3Z6R1 267 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Slu7Q8BHJ9 585 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Sirt1Q923E4 737 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Cetn2Q9R1K9 172 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Asxl1P59598 1514 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Cnnm3Q32NY4 713 aa19.48■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Nphp1Q9QY53 687 aa19.47■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Pafah1b1P63005 410 aaKnown RBP19.47■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Wdr33Q8K4P0 1330 aaKnown RBP19.47■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 CenphQ9QYM8 241 aa19.47■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Sptbn5F6UCX4 1208 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Hmgb2P30681 210 aaKnown RBP19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Lamb3Q61087 1168 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Stk3Q9JI10 497 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Sos1Q62245 1319 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Riok1Q922Q2 567 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Plekhd1B2RPU2 505 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Rufy2Q8R4C2 606 aa19.46■□□□□ 0.71
Ccdc88a-201ENSMUST00000040182 Kcnh8P59111 1102 aa19.45■□□□□ 0.7
Ccdc88a-201ENSMUST00000040182 Cd109Q8R422 1442 aa19.45■□□□□ 0.7
Ccdc88a-201ENSMUST00000040182 Washc4Q3UMB9 1173 aa19.45■□□□□ 0.7
Ccdc88a-201ENSMUST00000040182 IbspQ61711 324 aa19.45■□□□□ 0.7
Ccdc88a-201ENSMUST00000040182 Zpr1Q62384 459 aa19.45■□□□□ 0.7
Ccdc88a-201ENSMUST00000040182 Olfml1Q8BSH2 233 aa19.45■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms