RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Trap1aP19473 224 aa20.02■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Ccdc102aQ3TMW1 549 aa20.01■□□□□ 0.79
Col17a1-201ENSMUST00000026045 HdgfP51859 237 aaKnown RBP20.01■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Chmp4cQ9D7F7 232 aa20.01■□□□□ 0.79
Col17a1-201ENSMUST00000026045 PrxO55103 1391 aa20.01■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Gm42641I6L9G2 585 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Cers3Q1A3B0 383 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 AtripQ8BMG1 785 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Ccdc94Q9D6J3 314 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Kif3cO35066 796 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Ubxn4Q8VCH8 506 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Dydc1Q9D9T0 175 aa20■□□□□ 0.79
Col17a1-201ENSMUST00000026045 FanciQ8K368 1330 aa19.99■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Mad1l1Q9WTX8 717 aaKnown RBP19.99■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Zfp91Q62511 572 aa19.99■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Scaf1Q5U4C3 1256 aaKnown RBP19.98■□□□□ 0.79
Col17a1-201ENSMUST00000026045 L3mbtl2P59178 703 aa19.98■□□□□ 0.79
Col17a1-201ENSMUST00000026045 NmiO35309 314 aa19.98■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Fam114a1Q9D281 569 aa19.98■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Magi1Q6RHR9 1471 aa19.98■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Nek4Q9Z1J2 792 aa19.97■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Fam184aE9PW83 1143 aa19.97■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Sass6Q80UK7 654 aa19.97■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Hook1Q8BIL5 728 aa19.97■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Gtpbp4Q99ME9 634 aaKnown RBP19.96■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Q9D2X8 372 aa19.96■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Cavin4A2AMM0 362 aa19.96■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Naip5Q9R016 1403 aa19.96■□□□□ 0.79
Col17a1-201ENSMUST00000026045 Ggt6Q6PDE7 497 aa19.95■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Grin2aP35436 1464 aa19.95■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Rab11fip3Q8CHD8 1047 aa19.95■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Cetn4Q8K4K1 168 aa19.95■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Syce3B5KM66 88 aa19.94■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Srek1Q8BZX4 494 aaKnown RBP19.94■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Erich4Q3UNU4 136 aa19.94■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Rcan3Q9JKK0 239 aa19.94■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Stk11ipQ3TAA7 1072 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Wdr78E9PYY5 807 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Map9Q3TRR0 646 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Kiaa1211Q5PR69 1207 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 PdiltQ9DAN1 588 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Gpatch3Q8BIY1 525 aa19.93■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Rfx7F8VPJ6 1459 aa19.92■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Ncoa1P70365 1447 aa19.92■□□□□ 0.78
Col17a1-201ENSMUST00000026045 SkilQ60665 675 aa19.92■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Neo1P97798 1493 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Trim30cD3YVI9 513 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Hvcn1Q3U2S8 269 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Rec8Q8C5S7 591 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Asxl1P59598 1514 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Ccdc171E9Q1U1 1324 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Hnrnpul1Q8VDM6 859 aaKnown RBP19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Cavin1O54724 392 aa19.91■□□□□ 0.78
Col17a1-201ENSMUST00000026045 3425401B19RikD3Z1D3 1412 aa19.9■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Tceal9Q9DD24 104 aa19.9■□□□□ 0.78
Col17a1-201ENSMUST00000026045 NefhP19246 1090 aa19.9■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Sv2bQ8BG39 683 aa19.89■□□□□ 0.78
Col17a1-201ENSMUST00000026045 Hmox1P14901 289 aa19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Sall3Q62255 1320 aa19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Dnajc2P54103 621 aaKnown RBP19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Fyb1O35601 819 aa19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Rnf20Q5DTM8 973 aa19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Ppp1r9bQ6R891 817 aaKnown RBP19.89■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Rprd2Q6NXI6 1469 aaKnown RBP19.88■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Cdk19Q8BWD8 501 aa19.88■□□□□ 0.77
Col17a1-201ENSMUST00000026045 MpripP97434 1024 aa19.88■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Usp48Q3V0C5 1052 aa19.87■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Dhx8A2A4P0 1244 aaKnown RBP19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Lekr1B2RVN1 116 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 A0A1L1SQF0 893 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Cep112Q5PR68 954 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Chmp7Q8R1T1 451 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Sycp1Q62209 993 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Chrna2Q91X60 512 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Gpatch8A2A6A1 1505 aa19.86■□□□□ 0.77
Col17a1-201ENSMUST00000026045 ImpactO55091 318 aa19.85■□□□□ 0.77
Col17a1-201ENSMUST00000026045 ItpripQ3TNL8 555 aa19.85■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Serpina10Q8R121 448 aa19.85■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Ccar2Q8VDP4 922 aaKnown RBP19.85■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Afap1Q80YS6 731 aa19.85■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Kiaa0753Q6A000 959 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Cabp2Q9JLK4 216 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Cfdp1O88271 295 aaKnown RBP19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Bcl2l13P59017 434 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 MicalclQ9D5U9 680 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Cyp46a1Q9WVK8 500 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Ctr9Q62018 1173 aaKnown RBP19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Rnf187Q8BFX1 236 aa19.84■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Polr3aB2RXC6 1390 aa19.83■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Paxbp1P58501 919 aa19.83■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Gprasp1Q5U4C1 1347 aa19.83■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Gsdma3Q5Y4Y6 464 aa19.83■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Clcn1Q64347 994 aa19.83■□□□□ 0.77
Col17a1-201ENSMUST00000026045 Fbxo3Q9DC63 480 aa19.83■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Bag1Q60739 355 aa19.82■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Serpinb6bO08804 377 aa19.82■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Nat10Q8K224 1024 aaKnown RBP19.82■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Ints3Q7TPD0 1041 aaKnown RBP19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Tspyl2Q7TQI8 677 aa19.81■□□□□ 0.76
Col17a1-201ENSMUST00000026045 Dnaaf4Q8R368 420 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms