RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Usp48Q3V0C5 1052 aa14.76□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Gm1043A0A140LJC2 1431 aa14.76□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Sptbn5F6UCX4 1208 aa14.76□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Sirt1Q923E4 737 aa14.76□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Cdc37l1Q9CZP7 335 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Chmp4cQ9D7F7 232 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Crocc2F6XLV1 1638 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Ccp110Q7TSH4 1004 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Dixdc1Q80Y83 711 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Tomm22Q9CPQ3 142 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Fbxo2Q80UW2 297 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Cabp2Q9JLK4 216 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Rhot2Q8JZN7 620 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Cog6Q8R3I3 657 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Hnrnpul1Q8VDM6 859 aaKnown RBP14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Stk3Q9JI10 497 aa14.75□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Hs1bp3Q3TC93 395 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Dhx8A2A4P0 1244 aaKnown RBP14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Smc2Q8CG48 1191 aaKnown RBP14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 MvpQ9EQK5 861 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Ncoa1P70365 1447 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Odf2A3KGV1 830 aaKnown RBP14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Dennd6aQ8BH65 605 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Bcl2l13P59017 434 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Odf2lQ9D478 642 aa14.74□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Wwc1Q5SXA9 1104 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Znhit6Q3UFB2 460 aaKnown RBP14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Wdr78E9PYY5 807 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Gcom1E9PZ54 550 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 MyzapQ3UIJ9 466 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Taok2Q6ZQ29 1240 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Phf14Q9D4H9 881 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Stard3nlQ9DCI3 235 aa14.73□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Ttc21bQ0HA38 1315 aa14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Drc7Q6V3W6 876 aa14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Rnf214Q8BFU3 668 aaKnown RBP14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Lrrcc1Q69ZB0 1026 aa14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Zranb3Q6NZP1 1069 aa14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 PalmQ9Z0P4 383 aa14.72□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Zrsr2Q62377 462 aaKnown RBP14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Nol12Q8BG17 217 aa14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Fez1Q8K0X8 392 aa14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Rprd2Q6NXI6 1469 aaKnown RBP14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Cnnm1Q0GA42 951 aa14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Necab1Q8BG18 352 aa14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 CarsQ9ER72 831 aaKnown RBP14.71□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Afap1Q80YS6 731 aa14.71□□□□□ -0.06
Ldb3-201ENSMUST00000022327 BicraF8VPZ9 1578 aa14.7□□□□□ -0.06
Ldb3-201ENSMUST00000022327 L3mbtl2P59178 703 aa14.7□□□□□ -0.06
Ldb3-201ENSMUST00000022327 TkfcQ8VC30 578 aa14.7□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Nop14Q8R3N1 860 aaKnown RBP14.7□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Noc3lQ8VI84 807 aaKnown RBP14.7□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Naip5Q9R016 1403 aa14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Fkbp4P30416 458 aa14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Ftsj3Q9DBE9 838 aaKnown RBP14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Cwc27Q3TKY6 469 aa14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 BcanQ61361 883 aa14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Aldh1l1Q8R0Y6 902 aa14.69□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Cdkn1cP49919 348 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Smg7Q5RJH6 1138 aaKnown RBP14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Srgap3Q812A2 1099 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 FosbP13346 338 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Eva1cP58659 440 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Prl7d1P04769 244 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Ppp1r15aP17564 657 aa14.68□□□□□ -0.06
Ldb3-201ENSMUST00000022327 ScaperF8VQ70 1398 aaKnown RBP14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 NinlQ6ZQ12 1394 aa14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Plekhd1B2RPU2 505 aa14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Jakmip1Q8BVL9 626 aa14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Rbm28Q8CGC6 750 aaKnown RBP14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Pik3c2gO70167 1506 aa14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Maco1Q7TQE6 664 aaKnown RBP14.67□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Kcnh8P59111 1102 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Smc5Q8CG46 1101 aaKnown RBP14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Rrp9Q91WM3 475 aaKnown RBP14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Grin2aP35436 1464 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Kif3cO35066 796 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 TmpoQ61033 693 aaKnown RBP14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Agtpbp1Q641K1 1218 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 March6Q6ZQ89 909 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Ccdc43Q9CR29 222 aaKnown RBP14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Fam135aQ6NS59 1506 aa14.66□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Ssh1Q76I79 1042 aa14.65□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Stk38Q91VJ4 465 aa14.65□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Top1mtQ8R4U6 593 aa14.65□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Ppip5k2Q6ZQB6 1129 aa14.65□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Anp32eP97822 260 aaKnown RBP14.65□□□□□ -0.06
Ldb3-201ENSMUST00000022327 Stk11ipQ3TAA7 1072 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Mns1Q61884 491 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Cep57l1Q8VDS7 400 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Neo1P97798 1493 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Fam184aE9PW83 1143 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Camsap2Q8C1B1 1461 aa14.64□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Krt85Q9Z2T6 507 aa14.63□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Med4Q9CQA5 270 aa14.63□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Ppp6r1Q7TSI3 856 aa14.63□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Ankrd26Q811D2 1581 aa14.63□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Ggnbp2Q5SV77 696 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Rufy1Q8BIJ7 712 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 4930572O03RikQ8C5Y0 211 aa14.62□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms