RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Becn1O88597 448 aa14.4□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Ecm2Q5FW85 670 aa14.4□□□□□ -0.1
Sdc1-201ENSMUST00000020911 IqubQ8CDK3 788 aa14.4□□□□□ -0.1
Sdc1-201ENSMUST00000020911 KarsQ99MN1 595 aaKnown RBP14.4□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Zranb1Q7M760 708 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Afap1Q80YS6 731 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Yeats2Q3TUF7 1407 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Setd1aE9PYH6 1716 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Prdm4Q80V63 803 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Mbd3Q9Z2D8 285 aaKnown RBP14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Prex1Q69ZK0 1650 aa14.39□□□□□ -0.11
Sdc1-201ENSMUST00000020911 MsnP26041 577 aaKnown RBP14.38□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Cald1E9QA15 768 aaKnown RBP14.38□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Pnma3Q8JZW8 466 aa14.38□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Rab3gap2Q8BMG7 1366 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Shq1Q7TMX5 569 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Exosc9Q9JHI7 438 aaKnown RBP14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Fndc1E9Q043 1732 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Iqgap3F8VQ29 1632 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Gm16486A0A1D5RMD1 1434 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 AU022751B1B0V2 589 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Cfap65Q3V0B4 1847 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Uggt2E9Q4X2 1504 aa14.37□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Ercc6lQ8BHK9 1240 aa14.36□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Brd2Q7JJ13 798 aaKnown RBP14.36□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Mapk8ip3Q9ESN9 1337 aa14.35□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Sbno1Q689Z5 1390 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Sh3bp1P55194 680 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Tspyl2Q7TQI8 677 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 PtmaP26350 111 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Tmc1Q8R4P5 757 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Rwdd1Q9CQK7 243 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Q9D9H8 365 aa14.34□□□□□ -0.11
Sdc1-201ENSMUST00000020911 Dip2cE9PWR4 1557 aa14.33□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Zmym4A2A791 1549 aaKnown RBP14.33□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Rabep1O35551 862 aa14.33□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Rfx1P48377 963 aa14.33□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Kif16bB1AVY7 1312 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Ddit3P35639 168 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Pdcl2Q78Y63 240 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Zmynd15Q8C0R7 736 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Atp10aO54827 1508 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Adgrl3Q80TS3 1537 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 MlecQ6ZQI3 291 aaKnown RBP14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Plch2A2AP18 1501 aa14.32□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Tubgcp6G5E8P0 1769 aa14.31□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Rps6ka5Q8C050 863 aa14.31□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Nsfl1cQ9CZ44 370 aaKnown RBP14.31□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Isy1Q69ZQ2 285 aaKnown RBP14.31□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Polr3glQ8R0C0 218 aa14.31□□□□□ -0.12
Sdc1-201ENSMUST00000020911 FanciQ8K368 1330 aa14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Mfap1aC0HKD8 439 aaKnown RBP14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Mfap1bC0HKD9 439 aaKnown RBP14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Wdr78E9PYY5 807 aa14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Terf2O35144 541 aa14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Utp14aQ640M1 767 aaKnown RBP14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Golga2Q921M4 999 aa14.3□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Nphp4P59240 1425 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Adgrb3Q80ZF8 1522 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Prr29B1ARI9 187 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 MycnP03966 462 aaKnown RBP14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Serpina10Q8R121 448 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Tex14Q7M6U3 1450 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Arhgap4B1AUY3 965 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Fez1Q8K0X8 392 aa14.29□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Rims1Q99NE5 1463 aa14.28□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Tmem131lQ3U3D7 1597 aa14.28□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Mrvi1Q9WUX5 899 aaKnown RBP14.28□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Topbp1Q6ZQF0 1515 aa14.28□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Abca8aQ8K442 1620 aa14.28□□□□□ -0.12
Sdc1-201ENSMUST00000020911 RereQ80TZ9 1558 aa14.27□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Pola1P33609 1465 aa14.27□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Q4VA45 678 aa14.27□□□□□ -0.12
Sdc1-201ENSMUST00000020911 CenpjQ569L8 1344 aa14.27□□□□□ -0.12
Sdc1-201ENSMUST00000020911 Cep152A2AUM9 1736 aaKnown RBP14.27□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Pnmal2G3X9N3 661 aa14.27□□□□□ -0.13
Sdc1-201ENSMUST00000020911 U2af2P26369 475 aaKnown RBP14.27□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Rangap1P46061 589 aaKnown RBP14.27□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Clasp1Q80TV8 1535 aaKnown RBP14.27□□□□□ -0.13
Sdc1-201ENSMUST00000020911 NcapgE9PWG6 1004 aa14.26□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Talpid3E9PV87 1520 aa14.26□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Lrrc7Q80TE7 1490 aa14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Dmrtc1Q9D9R7 182 aa14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Skint5A7XUY5 1461 aa14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Q8BT18 775 aa14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Gtpbp4Q99ME9 634 aaKnown RBP14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Cdc42bpgQ80UW5 1551 aa14.25□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Erich4Q3UNU4 136 aa14.24□□□□□ -0.13
Sdc1-201ENSMUST00000020911 AglF8VPN4 1532 aa14.24□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Itsn2Q9Z0R6 1659 aa14.24□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Ccdc30Q8BVF4 654 aa14.24□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Prrc2bQ7TPM1 1486 aaKnown RBP14.24□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Cdk5rap2Q8K389 1822 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Ehbp1l1Q99MS7 1716 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Asxl2Q8BZ32 1370 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Grpel1Q99LP6 217 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 U2af1Q9D883 239 aaKnown RBP14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Slc52a2Q9D8F3 450 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Atp2b2Q9R0K7 1198 aa14.23□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Kdm5aQ3UXZ9 1690 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms