RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Ttc12Q8BW49 704 aa7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Exosc9Q9JHI7 438 aaKnown RBP7.75□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Zfp853A0A1D5RM95 733 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Kif2aP28740 705 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 4930548H24RikQ9D496 437 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Plb1Q3TTY0 1478 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ddx23D3Z0M9 819 aaKnown RBP7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Cage1Q5IR70 849 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Sept7O55131 436 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Specc1lQ2KN98 1118 aaKnown RBP7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Card11Q8CIS0 1159 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Bicd2Q921C5 820 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Letm1Q9Z2I0 738 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Mrpl40Q9Z2Q5 206 aa7.74□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ccdc152E9PX14 254 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Pcmtd1P59913 357 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Nup155Q99P88 1391 aaKnown RBP7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Tubb2aQ7TMM9 445 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Fam13bQ8K2H3 851 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Kri1Q8VDQ9 704 aaKnown RBP7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Tubb2bQ9CWF2 445 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Klhl10Q9D5V2 608 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Naip1Q9QWK5 1403 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Smarcc1P97496 1104 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Naa15Q80UM3 865 aaKnown RBP7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Grin2aP35436 1464 aa7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 AnlnQ8K298 1121 aaKnown RBP7.73□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ppip5k1A2ARP1 1436 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Ccdc39Q9D5Y1 937 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 NexnQ7TPW1 607 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Cfap58B2RW38 873 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Spats2Q8K1N4 545 aaKnown RBP7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Rab3il1Q8VDV3 383 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Med4Q9CQA5 270 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Smco2Q9DA21 347 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Fbxo3Q9DC63 480 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Nsrp1Q5NCR9 542 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Dnajc2P54103 621 aaKnown RBP7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 PodnQ7TQ62 611 aa7.72□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Nol12Q8BG17 217 aa7.71□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Tnip1Q9WUU8 647 aa7.71□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Gtpbp4Q99ME9 634 aaKnown RBP7.71□□□□□ -1.17
Clcn5-201ENSMUST00000004428 DroshaQ5HZJ0 1373 aaKnown RBP7.71□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Rad54l2Q99NG0 1466 aa7.71□□□□□ -1.17
Clcn5-201ENSMUST00000004428 Pnmal2G3X9N3 661 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Erc2Q6PH08 957 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Frmd3Q8BHD4 595 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ankrd1Q9CR42 319 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Caskin1Q6P9K8 1431 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Slc4a3P16283 1227 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Arhgef18Q6P9R4 1021 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Pkd2O35245 966 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Stmn1P54227 149 aaKnown RBP7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Sparcl1P70663 650 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rassf8Q8CJ96 419 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Mipol1Q9D9F8 279 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Cfap45Q9D9U9 551 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 ZfxP17012 799 aa7.71□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ccdc114Q3UX62 658 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rgl3Q3UYI5 709 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Q8R1Y2 203 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ccdc96Q9CR92 584 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rec8Q8C5S7 591 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 SarnpQ9D1J3 210 aaKnown RBP7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Il16O54824 1322 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Abcf1Q6P542 837 aaKnown RBP7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Taf7Q9R1C0 341 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Prdm10Q3UTQ7 1184 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Cavin2Q63918 418 aaKnown RBP7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 B4galnt3Q6L8S8 986 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rassf2Q8BMS9 326 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Golga1Q9CW79 758 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Akap8Q9DBR0 687 aaKnown RBP7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ms4a1P19437 291 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rsrc1Q9DBU6 334 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Cacna2d3Q9Z1L5 1091 aa7.7□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Mlh3A0A1Y7VMP7 1443 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ccdc171E9Q1U1 1324 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Hs1bp3Q3TC93 395 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Luzp1Q8R4U7 1068 aaKnown RBP7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Gm20521D3Z5F7 333 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Zfp651E9PZ11 729 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Cabp1Q9JLK7 227 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Sart1Q9Z315 806 aaKnown RBP7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Suds3Q8BR65 328 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ccdc94Q9D6J3 314 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rfx7F8VPJ6 1459 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Rimbp2Q80U40 1072 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Ift74Q8BKE9 600 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Mphosph9A6H5Y1 991 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Akap2O54931 893 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Hoxc8P09025 242 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Nap1l5Q9JJF0 156 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Myo6Q64331 1265 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Tacc1Q6Y685 774 aa7.69□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Limch1Q3UH68 1057 aa7.68□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Cdkl5Q3UTQ8 938 aa7.68□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Gbp2Q9Z0E6 589 aa7.68□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Dbr1Q923B1 550 aa7.68□□□□□ -1.18
Clcn5-201ENSMUST00000004428 Fmnl2A2APV2 1086 aa7.68□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms