RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CCNFP41002 786 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 BAG6P46379 1132 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 GRIA4P48058 902 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 ARHGDIAP52565 204 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 SLC18A1P54219 525 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 NUP107P57740 925 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 OGDHQ02218 1023 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 IMPG1Q17R60 797 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 CNPY1Q3B7I2 92 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 SH3PXD2AQ5TCZ1 1133 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 SPATA6LQ8N4H0 392 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 SLC2A14Q8TDB8 520 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 ULK4Q96C45 1275 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 FICDQ9BVA6 458 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 ASB7Q9H672 318 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 SYBUQ9NX95 663 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 ATXN10Q9UBB4 475 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 PSMD13Q9UNM6 376 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 LRP6O75581 1613 aa10.44□□□□□ -0.74
SMARCC2-209ENST00000550164 CXorf49A8MYA2 514 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 INPP4BO15327 924 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 CLOCKO15516 846 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ANXA9O76027 345 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 MYL3P08590 195 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NR1H2P55055 460 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 MAP3K7CLP57077 242 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 C1orf220Q5T0J3 134 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NAT14Q8WUY8 206 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 EDEM1Q92611 657 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 MAML3Q96JK9 1138 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FIZ1Q96SL8 496 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SEPHS2Q99611 448 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SNTG2Q9NY99 539 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 C6orf203Q9P0P8 240 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 VTI1BQ9UEU0 232 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 C16orf96A6NNT2 1141 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 M0R3G1 203 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 RTN3O95197 1032 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ETFBP38117 255 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FKBP1AP62942 108 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FSTL1Q12841 308 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF235Q14590 738 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF470Q6ECI4 717 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SLC39A4Q6P5W5 647 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FAR2Q96K12 515 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 DNAJC1Q96KC8 554 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 LENG8Q96PV6 779 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 EGFL8Q99944 293 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 GPRC5DQ9NZD1 345 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ITGA11Q9UKX5 1188 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 UBQLN1Q9UMX0 589 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NR2E3Q9Y5X4 410 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 CHD4Q14839 1912 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SLIT2O94813 1529 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 MYO5AQ9Y4I1 1855 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF839A8K0R7 811 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 DHX15O43143 795 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 PAPSS1O43252 624 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 BAIAP3O94812 1187 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 DPEP1P16444 411 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 PSEN1P49768 467 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 CDH17Q12864 832 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 KLF1Q13351 362 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SV2CQ496J9 727 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF555Q8NEP9 628 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 PRR11Q96HE9 360 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF670Q9BS34 389 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 NTPCRQ9BSD7 190 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 UBE2OQ9C0C9 1292 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 STN1Q9H668 368 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 HACD3Q9P035 362 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 POMPQ9Y244 141 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF189O75820 626 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 MPSTP25325 297 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FASP25445 335 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ABL2P42684 1182 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 GALK1P51570 392 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 TKTL1P51854 596 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 TSPY1Q01534 308 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 AASDHQ4L235 1098 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 C6orf52Q5T4I8 152 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ANGPTL8Q6UXH0 198 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ABHD15Q6UXT9 468 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ENDOVQ8N8Q3 282 aaKnown RBP10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 FNIP1Q8TF40 1166 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 KCTD4Q8WVF5 259 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 CLEC4DQ8WXI8 215 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 DLG3Q92796 817 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 RRN3Q9NYV6 651 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 SLC17A6Q9P2U8 582 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 COPG2Q9UBF2 871 aa10.43□□□□□ -0.74
SMARCC2-209ENST00000550164 ZNF142P52746 1687 aaPredicted RBP10.42□□□□□ -0.74
SMARCC2-209ENST00000550164 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
SMARCC2-209ENST00000550164 DYNC1LI2O43237 492 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms