RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UGT1A6P19224 532 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UGT1A1P22309 533 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UGT1A4P22310 534 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UGT1A3P35503 534 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UGT1A5P35504 534 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 TNFSF9P41273 254 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CRKP46108 304 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CSRP3P50461 194 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 TUBA4AP68366 448 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 ZNF829Q3KNS6 432 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 XKR9Q5GH70 373 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CLVS1Q8IUQ0 354 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 SLC7A5P1Q8MH63 180 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CIB1Q99828 191 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 GLIS2Q9BZE0 524 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 HIPK3Q9H422 1215 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 Q9H521 79 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 PI4KBQ9UBF8 816 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 PCDHGC3Q9UN70 934 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 LCTP09848 1927 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 KCNN4O15554 427 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 KRT38O76015 456 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 LSM8O95777 96 aaKnown RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CKMT2P17540 419 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 DCKP27707 260 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 PRKG1Q13976 671 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 ZFP1Q6P2D0 407 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CPSF7Q8N684 471 aaKnown RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 SLC15A4Q8N697 577 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 APBB2Q92870 758 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 NPAS2Q99743 824 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 TRNAU1APQ9NX07 287 aaKnown RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 USP18Q9UMW8 372 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 FAF1Q9UNN5 650 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ASS1P00966 412 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 RALBP11234 206 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ASPAP45381 313 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 BNIP3Q12983 259 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ORC1Q13415 861 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 CA9Q16790 459 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 WDR44Q5JSH3 913 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 KYQ8NBH2 561 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 KCTD6Q8NC69 237 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 FNIP1Q8TF40 1166 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 GFM2Q969S9 779 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 CSF3RQ99062 836 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 IDI2Q9BXS1 227 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 CISHQ9NSE2 258 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 IPO11Q9UI26 975 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 TRIM17Q9Y577 477 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 FADS3Q9Y5Q0 445 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 SQORQ9Y6N5 450 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 MATN2O00339 956 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 HMGCRP04035 888 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 KRT3P12035 628 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 MPSTP25325 297 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 RCVRNP35243 200 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 STILQ15468 1287 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ZBED5Q49AG3 693 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 BNC2Q6ZN30 1099 aaPredicted RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 CLEC14AQ86T13 490 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 TRIM50Q86XT4 487 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 PCDH19Q8TAB3 1148 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 SNX27Q96L92 541 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 GPATCH1Q9BRR8 931 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 TMEM79Q9BSE2 394 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 MCMBPQ9BTE3 642 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 SMOXQ9NWM0 555 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 HMGXB4Q9UGU5 601 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 RGSL1A5PLK6 1076 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 H0YJX3 145 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 MCF2LO15068 1137 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 TRIM24O15164 1050 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 AKAP10O43572 662 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 GRAMD4Q6IC98 578 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 LDHDQ86WU2 507 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 PGAM4Q8N0Y7 254 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 LSMEM2Q8N112 164 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ACDQ96AP0 544 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 DCPSQ96C86 337 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 FERMT1Q9BQL6 677 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 PAIP1Q9H074 479 aaKnown RBP11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms