RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SMOC1Q9H4F8 434 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 ITM2CQ9NQX7 267 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 USP36Q9P275 1121 aaKnown RBP28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 SPTBN4Q9H254 2564 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 NDUFS2O75306 463 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 ACADMP11310 421 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 PTGER3P43115 390 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 GSCP56915 257 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 PTP4A2Q12974 167 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 C5orf22Q49AR2 442 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 LYSMD4Q5XG99 296 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 ARMCX6Q7L4S7 300 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 BNIPLQ7Z465 357 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 PHLDB2Q86SQ0 1253 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 EMC1Q8N766 993 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 ZNF366Q8N895 744 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 PIGKQ92643 395 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 ERVW-1Q9UQF0 538 aa28.48■■■□□ 2.15
ATPAF1-201ENST00000329231 CKAP5Q14008 2032 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 CEP250Q9BV73 2442 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 CLDN11O75508 207 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 SRPRAP08240 638 aaKnown RBP28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 PDGFRAP16234 1089 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 CD6P30203 668 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 SDC4P31431 198 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 GGCXP38435 758 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 ECT2LQ008S8 904 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 ZNF177Q13360 481 aaPredicted RBP28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 NR1I3Q14994 352 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 RNF219Q5W0B1 726 aaPredicted RBP28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 IRF2BP2Q7Z5L9 587 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 C14orf80Q86SX3 495 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 C1orf74Q96LT6 269 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 CD93Q9NPY3 652 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 PRSS16Q9NQE7 514 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 ANLNQ9NQW6 1124 aa28.47■■■□□ 2.15
ATPAF1-201ENST00000329231 ENDOD1O94919 500 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 KRT3P12035 628 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 OXTRP30559 389 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 TPMTP51580 245 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 PLK1P53350 603 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 ATXN1P54253 815 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 CDH4P55283 916 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 ATP11AP98196 1134 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 SULT2A1Q06520 285 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 CXorf57Q6NSI4 855 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 LRRC31Q6UY01 552 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 SYT12Q8IV01 421 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 APCDD1Q8J025 514 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 RXFP2Q8WXD0 754 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 MYO19Q96H55 970 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 MRGPRX3Q96LB0 322 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 HAPLN3Q96S86 360 aa28.46■■■□□ 2.15
ATPAF1-201ENST00000329231 MUC22E2RYF6 1773 aaPredicted RBP28.45■■■□□ 2.15
ATPAF1-201ENST00000329231 C2CD4BA6NLJ0 364 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 LRRC53A6NM62 1247 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 GOLGA6L19H0YKK7 550 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 I6L893 689 aaPredicted RBP28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 GDF9O60383 454 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 C1QBPQ07021 282 aaKnown RBP28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 MON1BQ7L1V2 547 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 FAM131BQ86XD5 332 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 DEFB119Q8N690 84 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 C3orf20Q8ND61 904 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 RTKNQ9BST9 563 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 SELENOOQ9BVL4 669 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 EDEM3Q9BZQ6 932 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 DMXL1Q9Y485 3027 aa28.45■■■□□ 2.14
ATPAF1-201ENST00000329231 KHNYNO15037 678 aaKnown RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 C7P10643 843 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 TNFAIP3P21580 790 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 MZF1P28698 734 aaPredicted RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 CTSOP43234 321 aaPredicted RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 PTPN9P43378 593 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 IRAK1P51617 712 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 FANCCQ00597 558 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 ZNF33AQ06730 810 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 ARID5BQ14865 1188 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 ASIC2Q16515 512 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 HNRNPA1L2Q32P51 320 aaKnown RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 CCDC14Q49A88 953 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 TCEAL6Q6IPX3 200 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 PPP1R2P3Q6NXS1 205 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 ERMP1Q7Z2K6 904 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 CACUL1Q86Y37 369 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 JOSD2Q8TAC2 188 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 TCEAL3Q969E4 200 aa28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 TOE1Q96GM8 510 aaKnown RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 WSB2Q9NYS7 404 aaPredicted RBP28.44■■■□□ 2.14
ATPAF1-201ENST00000329231 SLC30A4O14863 429 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 IGLV3-19P01714 112 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 HOXD12P35452 270 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 NNMTP40261 264 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 LIMK1P53667 647 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 ZBTB16Q05516 673 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 CDO1Q16878 200 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 SFMBT2Q5VUG0 894 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 ACAD10Q6JQN1 1059 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms