RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 DTHD1Q6ZMT9 781 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 RBM44Q6ZP01 1051 aaKnown RBP7.17□□□□□ -1.26
MUC1-221ENST00000610359 SCD5Q86SK9 330 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 IQCHQ86VS3 1027 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 DENND1CQ8IV53 801 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 MMAAQ8IVH4 418 aaKnown RBP7.17□□□□□ -1.26
MUC1-221ENST00000610359 FUKQ8N0W3 1084 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 CPXM2Q8N436 756 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
MUC1-221ENST00000610359 OR14C36Q8NHC7 312 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 WFDC5Q8TCV5 224 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 WFIKKN2Q8TEU8 576 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 SMARCD1Q96GM5 515 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ANKRD36BP1Q96IX9 119 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 OMDQ99983 421 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 CBWD1Q9BRT8 395 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 MED10Q9BTT4 135 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ADNPQ9H2P0 1102 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 FBXO44Q9H4M3 255 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 CSNK1G1Q9HCP0 422 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 KRT82Q9NSB4 513 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ABCB8Q9NUT2 735 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 NLGN3Q9NZ94 848 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 SEL1LQ9UBV2 794 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 SUN2Q9UH99 717 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ANAPC2Q9UJX6 822 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ACSL6Q9UKU0 697 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 SCML2Q9UQR0 700 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 PCDHGA7Q9Y5G6 932 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 DNHD1Q96M86 4753 aa7.17□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3DA0A087WVF3 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3IA0A087WXS9 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3EA0A087X179 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3KA0A087X1G2 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 CCDC187A0A096LP49 1063 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 A1L4Q6 167 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 CPED1A4D0V7 1026 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3FA6NER0 549 aaPredicted RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3LB9A6J9 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 K7ESM1 405 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 MTSS1O43312 755 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 LDHAP00338 332 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 CYBBP04839 570 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3HP0C7X1 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 LIPCP11150 499 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 CCDC130P13994 396 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 GOT1P17174 413 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 MAT2AP31153 395 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 SLC8A1P32418 973 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 ABCD1P33897 745 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 DDIT3P35638 169 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 DCTP40126 519 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 UQCRFS1P47985 274 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 HARS2P49590 506 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 METAP1P53582 386 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 MAP3K7CLP57077 242 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 OVGP1Q12889 678 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 KCNAB2Q13303 367 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 CDKN3Q16667 212 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 POM121L1PQ3SYA9 428 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 HS1BP3Q53T59 392 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 PERM1Q5SV97 790 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 C9orf64Q5T6V5 341 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3GQ6DHY5 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3CQ6IPX1 549 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■□□□□ 8.2
MUC1-221ENST00000610359 EFL1Q7Z2Z2 1120 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 TRAPPC11Q7Z392 1133 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 C14orf80Q86SX3 495 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 SRRM1Q8IYB3 904 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 TBC1D3Q8IZP1 549 aaPredicted RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 SPATA20Q8TB22 786 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 NOC3LQ8WTT2 800 aaKnown RBP7.16□□□□□ -1.26
MUC1-221ENST00000610359 KLHDC7BQ96G42 594 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 MRGPRX3Q96LB0 322 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 KDM4CQ9H3R0 1056 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 USP29Q9HBJ7 922 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 KLHL11Q9NVR0 708 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 CYTH4Q9UIA0 394 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 RASAL2Q9UJF2 1139 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 GGA2Q9UJY4 613 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 ATP8B3O60423 1300 aa7.16□□□□□ -1.26
MUC1-221ENST00000610359 ZNF106Q9H2Y7 1883 aaKnown RBP7.15□□□□□ -1.26
MUC1-221ENST00000610359 FBN3Q75N90 2809 aa7.15□□□□□ -1.26
MUC1-221ENST00000610359 TNRC6AQ8NDV7 1962 aaKnown RBP7.15□□□□□ -1.26
MUC1-221ENST00000610359 CSMD2Q7Z408 3487 aa7.15□□□□□ -1.26
MUC1-221ENST00000610359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.15□□□□□ -1.26
MUC1-221ENST00000610359 PLD2O14939 933 aa7.15□□□□□ -1.26
MUC1-221ENST00000610359 SCAMP1O15126 338 aa7.15□□□□□ -1.26
MUC1-221ENST00000610359 MAGEC1O60732 1142 aa7.15□□□□□ -1.26
MUC1-221ENST00000610359 TBCAO75347 108 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms