RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RASA4BC9J798 803 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CES2O00748 559 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 PPIP5K2O43314 1243 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 RASA4O43374 803 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 NCK2O43639 380 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 SNX2O60749 519 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 PDE8BO95263 885 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 NTSR1P30989 418 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 ATICP31939 592 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 EPHX2P34913 555 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 COPAP53621 1224 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CYP4F2P78329 520 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 NHLH1Q02575 133 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CXCL9Q07325 125 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 GCKRQ14397 625 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC152Q4G0S7 254 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 NAPRTQ6XQN6 538 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 G2E3Q7L622 706 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 FAM9BQ8IZU0 186 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 OR2C3Q8N628 320 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 C11orf44Q8N8P7 122 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC150Q8NCX0 1101 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 DNAAF4Q8WXU2 420 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZDHHC12Q96GR4 267 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 TNIP3Q96KP6 325 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 GDF15Q99988 308 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 MAGEB5Q9BZ81 275 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 TRIM36Q9NQ86 728 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 CHST12Q9NRB3 414 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 FNIP2Q9P278 1114 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 VPS51Q9UID3 782 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 AMFRQ9UKV5 643 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 MYH13Q9UKX3 1938 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 PCNTO95613 3336 aa4.21□□□□□ -1.73
CKS1BP3-201ENST00000600888 THSD7BQ9C0I4 1608 aa4.21□□□□□ -1.73
CKS1BP3-201ENST00000600888 M0R3H8 397 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 PLIN1O60240 522 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 FGAP02671 866 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 HARSP12081 509 aaKnown RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 MYCLP12524 364 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 MYL4P12829 197 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 CD19P15391 556 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 HOXA4Q00056 320 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 FHL3Q13643 280 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 PMS2P11Q13670 270 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 TNIP1Q15025 636 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 BEND3Q5T5X7 828 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 IZUMO3Q5VZ72 239 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 FCRLBQ6BAA4 426 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 CLEC9AQ6UXN8 241 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 KIAA0408Q6ZU52 694 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 PTCHD4Q6ZW05 846 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 USP49Q70CQ1 688 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 USP50Q70EL3 339 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 SRLQ86TD4 932 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 ANKRD18AQ8IVF6 992 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 TXLNBQ8N3L3 684 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 METTL25Q8N6Q8 603 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 TBC1D16Q8TBP0 767 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 NTN5Q8WTR8 489 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 EYA3Q99504 573 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 MACROD1Q9BQ69 325 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 SELENOOQ9BVL4 669 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZCWPW1Q9H0M4 648 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZBTB26Q9HCK0 441 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 ADARB2Q9NS39 739 aaKnown RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 SH3BP4Q9P0V3 963 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 PTGFRNQ9P2B2 879 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 LPAR3Q9UBY5 353 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 NKX1-2Q9UD57 310 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 SERGEFQ9UGK8 458 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 POLLQ9UGP5 575 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 RIMKLBQ9ULI2 386 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 MAN2B2Q9Y2E5 1009 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 SLC27A6Q9Y2P4 619 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 LAMB1P07942 1786 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 AKAP11Q9UKA4 1901 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 ARAP2Q8WZ64 1704 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 UTYO14607 1347 aa4.21□□□□□ -1.74
CKS1BP3-201ENST00000600888 MED23Q9ULK4 1368 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 YDJCA8MPS7 323 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 TCERG1O14776 1098 aaKnown RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SPRY2O43597 315 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 EXOC3O60645 756 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 COQ9O75208 318 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 C1RP00736 705 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 CREB1P16220 341 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 FPR3P25089 353 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 RPS12P25398 132 aaKnown RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 EPS15P42566 896 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 MMP14P50281 582 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 PROK1P58294 105 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 PSG6Q00889 435 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 TFF2Q03403 129 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 ALDH1L2Q3SY69 923 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 RNASE12Q5GAN4 147 aaKnown RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SUMO4Q6EEV6 95 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms