RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 C14orf80Q86SX3 495 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 NT5DC3Q86UY8 548 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 MAP7D3Q8IWC1 876 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 MSANTD3Q96H12 275 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 DDX56Q9NY93 547 aaKnown RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 HYOU1Q9Y4L1 999 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 COL4A2P08572 1712 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 MIA3Q5JRA6 1907 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 FAM72CH0Y354 149 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 TRDMT1O14717 391 aaKnown RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 ZNF185O15231 689 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 TSPAN3O60637 253 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 LRIG2O94898 1065 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 TYRP14679 529 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 GJA4P35212 333 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PDK2Q15119 407 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 SMTNL2Q2TAL5 461 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 ANO4Q32M45 955 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 FAM72AQ5TYM5 149 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 FAM72DQ6L9T8 149 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PEX26Q7Z412 305 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 FAM72BQ86X60 149 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PRICKLE1Q96MT3 831 aaPredicted RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 NECAB3Q96P71 396 aaPredicted RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PSMB7Q99436 277 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 SLC2A11Q9BYW1 496 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 MAGEB5Q9BZ81 275 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 RCOR3Q9P2K3 495 aaPredicted RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PACSIN2Q9UNF0 486 aaPredicted RBP17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
RPRD1A-209ENST00000590898 CCDC66A2RUB6 948 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CACNG3O60359 315 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 HOXD9P28356 352 aaPredicted RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 HOXC13P31276 330 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 EIF2DP41214 584 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 ARSEP51690 589 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 VCPP55072 806 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 RPS24P62847 133 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CA9Q16790 459 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 ATP13A4Q4VNC1 1196 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 SLC44A4Q53GD3 710 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CHST9Q7L1S5 443 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 RALGPS2Q86X27 583 aaPredicted RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 VSIG1Q86XK7 387 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 PYROXD2Q8N2H3 581 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 HSPH1Q92598 858 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 IGSF8Q969P0 613 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 ZYG11BQ9C0D3 744 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 GPATCH2LQ9NWQ4 482 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 DONSONQ9NYP3 566 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 SNX10Q9Y5X0 201 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 A0A1B0GVM2 712 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 TCAF2A6NFQ2 919 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 NEDD8-MDP1E9PL57 170 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 TBL1XO60907 577 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CLDN11O75508 207 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CTNNA2P26232 953 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CTNNA1P35221 906 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CDH4P55283 916 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 GAB4Q2WGN9 574 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 ETFBKMTQ8IXQ9 262 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 KCTD6Q8NC69 237 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 EXOC4Q96A65 974 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 TBC1D31Q96DN5 1066 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 MYEOVQ96EZ4 313 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 TLR10Q9BXR5 811 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 STIM2Q9P246 746 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 SAR1BQ9Y6B6 198 aa17.59■□□□□ 0.41
RPRD1A-209ENST00000590898 CHD5Q8TDI0 1954 aa17.58■□□□□ 0.41
RPRD1A-209ENST00000590898 ZNF487B1APH4 448 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 CXCR5P32302 372 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 GGCXP38435 758 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 ARL4AP40617 200 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 DNA2P51530 1060 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 CDH6P55285 790 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 PREPLQ4J6C6 727 aaPredicted RBP17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 PPP6R3Q5H9R7 873 aaPredicted RBP17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 KATNAL2Q8IYT4 538 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 CFAP52Q8N1V2 620 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 P2RY11Q96G91 374 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 CAPZA3Q96KX2 299 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 CATSPERBQ9H7T0 1116 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 PCDH18Q9HCL0 1135 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 HEBP1Q9NRV9 189 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 MUTYHQ9UIF7 546 aa17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 MYO18AQ92614 2054 aaKnown RBP17.58■□□□□ 0.4
RPRD1A-209ENST00000590898 EEF2KO00418 725 aaKnown RBP17.57■□□□□ 0.4
RPRD1A-209ENST00000590898 FGF10O15520 208 aaPredicted RBP17.57■□□□□ 0.4
RPRD1A-209ENST00000590898 CREB3O43889 395 aa17.57■□□□□ 0.4
RPRD1A-209ENST00000590898 RHOQP17081 205 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms