RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KPNA6O60684 536 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 DHRS4L1P0CG22 281 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 FCGRTP55899 365 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 DSC3Q14574 896 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PAFAH1B3Q15102 231 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 CASC4Q6P4E1 433 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 SLC30A9Q6PML9 568 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 TAC4Q86UU9 113 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 MFN1Q8IWA4 741 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 RFWD2Q8NHY2 731 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 ERP27Q96DN0 273 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 STAMBPL1Q96FJ0 436 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 SMARCD1Q96GM5 515 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 SRPK1Q96SB4 655 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 FRMD8Q9BZ67 464 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 CNGB3Q9NQW8 809 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 NOP53Q9NZM5 478 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 TM9SF1O15321 606 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 BGNP21810 368 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 GMPRP36959 345 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 COL4A4P53420 1690 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 MROH9Q5TGP6 573 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 TTC39BQ5VTQ0 682 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 CCSAPQ6IQ19 270 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PSTKQ8IV42 348 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 ARNTL2Q8WYA1 636 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 AGAP3Q96P47 875 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PKMYT1Q99640 499 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 SYBUQ9NX95 663 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PCDHA11Q9Y5I1 949 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 PSAT1Q9Y617 370 aa15.61■□□□□ 0.09
SCAMP4-202ENST00000409472 TMEM88BA6NKF7 163 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 HACD1B0YJ81 288 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 OR4Q2P0C623 313 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ALADP13716 330 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 GLUD2P49448 558 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 TPI1P60174 286 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 SEPT7Q16181 437 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 HACE1Q8IYU2 909 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 SLC13A1Q9BZW2 595 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 SPC25Q9HBM1 224 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 XAB2Q9HCS7 855 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 PCMTD2Q9NV79 361 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 DCTN4Q9UJW0 460 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 FBXW11Q9UKB1 542 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ABT1Q9ULW3 272 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 A0A0U1RQF3 1178 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 C2orf71A6NGG8 1288 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 FBXO21O94952 628 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 RTN3O95197 1032 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ANP32DO95626 131 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ODC1P11926 461 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ZBTB17Q13105 803 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 PDK1Q15118 436 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 INTS6LQ5JSJ4 861 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 ALKBH8Q96BT7 664 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 GRAMD1AQ96CP6 724 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 LRRC39Q96DD0 335 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 TKTL2Q9H0I9 626 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 CSNK1G1Q9HCP0 422 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 PTCH2Q9Y6C5 1203 aa15.6■□□□□ 0.09
SCAMP4-202ENST00000409472 PATJQ8NI35 1801 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 A8MUI8 341 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 C9IYK1 514 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 PTPN3P26045 913 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 SCAPQ12770 1279 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 SREBF2Q12772 1141 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 NTAN1Q96AB6 310 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 CELF6Q96J87 481 aaKnown RBP15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 MANSC1Q9H8J5 431 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 MAGED2Q9UNF1 606 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 TLL2Q9Y6L7 1015 aa15.59■□□□□ 0.09
SCAMP4-202ENST00000409472 SF3B1O75533 1304 aaKnown RBP eCLIP15.59■□□□□ 0.099e-6■■■■■ 68.9
SCAMP4-202ENST00000409472 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 CCDC195A0A1B0GUA6 201 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 COPEO14579 308 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 OPHN1O60890 802 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 LRIG2O94898 1065 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 SNRPAP09012 282 aaKnown RBP15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 PCSK1P29120 753 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 RPL9P32969 192 aaKnown RBP15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 SERPINB4P48594 390 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 TRIM71Q2Q1W2 868 aaKnown RBP15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 FAM171BQ6P995 826 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 KLHDC9Q8NEP7 349 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 RSPH1Q8WYR4 309 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 TMEM237Q96Q45 408 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 ZNF395Q9H8N7 513 aaPredicted RBP15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 RNF186Q9NXI6 227 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 MOCS1Q9NZB8 636 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 ZNF180Q9UJW8 692 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 NUDT5Q9UKK9 219 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 MYO16Q9Y6X6 1858 aa15.58■□□□□ 0.09
SCAMP4-202ENST00000409472 FRMPD3Q5JV73 1810 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms