RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 DERAQ9Y315 318 aa6.89□□□□□ -1.31
FAM49B-230ENST00000639004 COPG1Q9Y678 874 aaKnown RBP6.89□□□□□ -1.31
FAM49B-230ENST00000639004 AOX1Q06278 1338 aa6.89□□□□□ -1.31
FAM49B-230ENST00000639004 ARHGEF17Q96PE2 2063 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-230ENST00000639004 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PAX3P23760 479 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 VPS41P49754 854 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 ZNF84P51523 738 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 TFF2Q03403 129 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 LRRC24Q50LG9 513 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PRAMEF17Q5VTA0 474 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 KIAA1324Q6UXG2 1013 aaKnown RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 RANBP10Q6VN20 620 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 SLC39A5Q6ZMH5 540 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PNLDC1Q8NA58 520 aaKnown RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PNISRQ8TF01 805 aaKnown RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 USP13Q92995 863 aaPredicted RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PIGSQ96S52 555 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 NPAS1Q99742 590 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 NUAK2Q9H093 628 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 TMPRSS5Q9H3S3 457 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 PLEKHA2Q9HB19 425 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 GJD2Q9UKL4 321 aa6.88□□□□□ -1.31
FAM49B-230ENST00000639004 HEMK1Q9Y5R4 338 aaPredicted RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
FAM49B-230ENST00000639004 TISP43B9A030 160 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PYGLP06737 847 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 CNTFP26441 200 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PCP4P48539 62 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 ELLP55199 621 aaPredicted RBP6.87□□□□□ -1.31
FAM49B-230ENST00000639004 SLC37A1P57057 533 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PROK1P58294 105 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 KPNB1Q14974 876 aaKnown RBP6.87□□□□□ -1.31
FAM49B-230ENST00000639004 ALFQ53S48 1182 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 ZNF484Q5JVG2 852 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
FAM49B-230ENST00000639004 FBXO42Q6P3S6 717 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 LVRNQ6Q4G3 990 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PTGR2Q8N8N7 351 aaPredicted RBP6.87□□□□□ -1.31
FAM49B-230ENST00000639004 GPR78Q96P69 363 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 TWNKQ96RR1 684 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PRDM16Q9HAZ2 1276 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PDE11AQ9HCR9 933 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 GGA3Q9NZ52 723 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 PGAP2Q9UHJ9 254 aa6.87□□□□□ -1.31
FAM49B-230ENST00000639004 TMEM232C9JQI7 657 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 STX16-NPEPL1H3BU86 382 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 STX16O14662 325 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 NUDT3O95989 172 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 CNPP09543 421 aaKnown RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 CSF1P09603 554 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 CYP2A6P11509 494 aaPredicted RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 BMP5P22003 454 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 DMWDQ09019 674 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 SLC12A1Q13621 1099 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 CERKLQ49MI3 558 aaPredicted RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 TMEM119Q4V9L6 283 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 TMEM88Q6PEY1 159 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 FSIP1Q8NA03 581 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 CELF1Q92879 486 aaKnown RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 ARRDC3Q96B67 414 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 ASB2Q96Q27 587 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 HTATIP2Q9BUP3 242 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 HERC2P3Q9BVR0 1158 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 GATA5Q9BWX5 397 aaPredicted RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 RMI1Q9H9A7 625 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 DNAJC16Q9Y2G8 782 aa6.86□□□□□ -1.31
FAM49B-230ENST00000639004 RRP7AQ9Y3A4 280 aaKnown RBP6.86□□□□□ -1.31
FAM49B-230ENST00000639004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
FAM49B-230ENST00000639004 GRM8O00222 908 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 SEPT4O43236 478 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 POLBP06746 335 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 CHN1P15882 459 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 IDUAP35475 653 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 TUBA4AP68366 448 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 SHC2P98077 582 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 SEC23BQ15437 767 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 PFKFB3Q16875 520 aaPredicted RBP6.85□□□□□ -1.31
FAM49B-230ENST00000639004 CTXN3Q4LDR2 81 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 TFAP2DQ7Z6R9 452 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 RFX6Q8HWS3 928 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 ADGRF3Q8IZF5 1079 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 P2RY11Q96G91 374 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 TBATAQ96M53 351 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 ARL8BQ9NVJ2 186 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 PDP2Q9P2J9 529 aa6.85□□□□□ -1.31
FAM49B-230ENST00000639004 SPATA31A5Q5VU36 1347 aa6.84□□□□□ -1.31
FAM49B-230ENST00000639004 SPATA31A6Q5VVP1 1343 aa6.84□□□□□ -1.31
FAM49B-230ENST00000639004 SPATA31A7Q8IWB4 1347 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms