RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 LRRC59Q96AG4 307 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 SYTL4Q96C24 671 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 HDAC11Q96DB2 347 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 C1GALT1C1Q96EU7 318 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 CYFIP2Q96F07 1278 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 TMEM169Q96HH4 297 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 SUCLG2Q96I99 432 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 TPD52L3Q96J77 140 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 PIWIL1Q96J94 861 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 COX4I2Q96KJ9 171 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 RPRD1AQ96P16 312 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 SIN3AQ96ST3 1273 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 SLC9A7Q96T83 725 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 UHRF1Q96T88 793 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 HNRNPABQ99729 332 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 MIPEPQ99797 713 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 PDCD2LQ9BRP1 358 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRFN3Q9BTN0 628 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 COLEC11Q9BWP8 271 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 CELF4Q9BZC1 486 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 NUF2Q9BZD4 464 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 IKZF4Q9H2S9 585 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 LY9Q9HBG7 655 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 DDX28Q9NUL7 540 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 THG1LQ9NWX6 298 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 GMIPQ9P107 970 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 SEC63Q9UGP8 760 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 CORO2BQ9UQ03 480 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 RUVBL1Q9Y265 456 aaKnown RBP4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 FRMPD4Q14CM0 1322 aa4.67□□□□□ -1.66
HMGB3P26-201ENST00000560051 COL15A1P39059 1388 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 IBTKQ9P2D0 1353 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CYP3A7-CYP3A51PA0A087WV96 503 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 EME2A4GXA9 379 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TMEM247A6NEH6 219 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 F8W8V4 182 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 H0YAE9 185 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CXCL11O14625 94 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 MEIS2O14770 477 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TBX1O43435 398 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PROM1O43490 865 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CA12O43570 354 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRT86O43790 486 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GPRIN2O60269 458 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TBX10O75333 385 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SPAG6O75602 509 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRT36O76013 467 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 BEST1O76090 585 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 RECQL4O94761 1208 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 UBXN7O94888 489 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GCNT3O95395 438 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CBX7O95931 251 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CST3P01034 146 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 HMGN1P05114 100 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 FGF4P08620 206 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 NME1P15531 152 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 M6PRP20645 277 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 FGFR4P22455 802 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CYP3A7P24462 503 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 U2AF2P26368 475 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PTBP1P26599 531 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 HOXC8P31273 242 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 RRM2P31350 389 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GRK5P34947 590 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GCKP35557 465 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 HTR2BP41595 481 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CASP3P42574 277 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PIP4K2AP48426 406 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ARCN1P48444 511 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PCYT1AP49585 367 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PRRX1P54821 245 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ADARP55265 1226 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ATP5IP56385 69 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LINC00310P59036 64 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 MC1RQ01726 317 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PTPN11Q06124 597 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 KDSRQ06136 332 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PPARAQ07869 468 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LGALS3BPQ08380 585 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TBL3Q12788 808 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SPIDRQ14159 915 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 RAB3GAP1Q15042 981 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZMYND11Q15326 602 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SEC23AQ15436 765 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CHRNA6Q15825 494 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TYSND1Q2T9J0 566 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CTXN3Q4LDR2 81 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SNX30Q5VWJ9 437 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SCARA3Q6AZY7 606 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 OVOS1Q6IE37 1185 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ETFRF1Q6IPR1 90 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TAF2Q6P1X5 1199 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 MIER3Q7Z3K6 550 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LIMS2Q7Z4I7 341 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 OSTM1Q86WC4 334 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 HID1Q8IV36 788 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 DENND1CQ8IV53 801 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms