RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PTPN20Q4JDL3 420 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 AASDHQ4L235 1098 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 TTC39BQ5VTQ0 682 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 NADSYN1Q6IA69 706 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 SERPINA13PQ6UXR4 307 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 CHST9Q7L1S5 443 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 RNF34Q969K3 372 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 MRGPRX1Q96LB2 322 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 FBRSQ9HAH7 460 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 PRDM16Q9HAZ2 1276 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 DDIT4Q9NX09 232 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 STAP1Q9ULZ2 295 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 RAD54BQ9Y620 910 aa13.63□□□□□ -0.23
HNRNPC-205ENST00000553300 KHNYNO15037 678 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 DAB1O75553 588 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 MOCS3O95396 460 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 F9P00740 461 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 ERBB2P04626 1255 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 MATKP42679 507 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 POLR2FP61218 127 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 RPL6Q02878 288 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 CDH18Q13634 790 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 ACBD5Q5T8D3 534 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 RABEPKQ7Z6M1 372 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 ADIPOR2Q86V24 386 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 TMPRSS6Q8IU80 811 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 SYT12Q8IV01 421 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 KDM1BQ8NB78 822 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 EPS8L1Q8TE68 723 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 DDX1Q92499 740 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 TTC17Q96AE7 1141 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 SPAG5Q96R06 1193 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 PPP1R9BQ96SB3 815 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 NUCKS1Q9H1E3 243 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 GANQ9H2C0 597 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 FAM207AQ9NSI2 230 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 STIM2Q9P246 746 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 MBD1Q9UIS9 605 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-205ENST00000553300 LAMA1P25391 3075 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 IGHV1OR15-9A0A0B4J2B8 117 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 F5H5T6 163 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 GRAP2O75791 330 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 ASLP04424 464 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 EPHX1P07099 455 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 ZNF18P17022 549 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 TACR2P21452 398 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 OXTRP30559 389 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SOX5P35711 763 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 STAT1P42224 750 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SGSHP51688 502 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 OXCT1P55809 520 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 UBXN1Q04323 297 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 TYRO3Q06418 890 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SF3A2Q15428 464 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 LYSMD4Q5XG99 296 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.234e-6■■□□□ 12.7
HNRNPC-205ENST00000553300 ARCQ7LC44 396 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 CHSY1Q86X52 802 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 LGI2Q8N0V4 545 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 CARNMT1Q8N4J0 409 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 NEK11Q8NG66 645 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 PRCCQ92733 491 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 PGAP3Q96FM1 320 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SIPA1Q96FS4 1042 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 PRICKLE1Q96MT3 831 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 MKRN2Q9H000 416 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 TMEM245Q9H330 911 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 TMEM63CQ9P1W3 806 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 KIAA1522Q9P206 1035 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 EVLQ9UI08 416 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 CKAP5Q14008 2032 aa13.61□□□□□ -0.23
HNRNPC-205ENST00000553300 SMTNL1A8MU46 457 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 H0Y626 953 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 M0QYT0 321 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 NDUFS2O75306 463 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 GFPT2O94808 682 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 C7P10643 843 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 ACADMP11310 421 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CD70P32970 193 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms