RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 EHHADHQ08426 723 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 KNOP1Q1ED39 458 aaKnown RBP9.61□□□□□ -0.87
PTPN20-216ENST00000506080 ZACNQ401N2 412 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 UNC13DQ70J99 1090 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 CHST9Q7L1S5 443 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 CPXM2Q8N436 756 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 CNDP2Q96KP4 475 aaKnown RBP9.61□□□□□ -0.87
PTPN20-216ENST00000506080 ARID3AQ99856 593 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 C7orf25Q9BPX7 421 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 TMEM245Q9H330 911 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 PNPLA8Q9NP80 782 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 PRSS16Q9NQE7 514 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 CLIC5Q9NZA1 410 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 MARCH2Q9P0N8 246 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
PTPN20-216ENST00000506080 MUC22E2RYF6 1773 aaPredicted RBP9.61□□□□□ -0.87
PTPN20-216ENST00000506080 ASH1LQ9NR48 2969 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 RFPL3O75679 317 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ASS1P00966 412 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 HLA-DRAP01903 254 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 RPN1P04843 607 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 IGHV4-34P06331 123 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ITGAVP06756 1048 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CD58P19256 250 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 PDCP20941 246 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ABCB4P21439 1286 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 SYT1P21579 422 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 HOXD9P28356 352 aaPredicted RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 HLA-FP30511 346 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 PIK3CAP42336 1068 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CLDN10P78369 228 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 TARDBPQ13148 414 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 STK38Q15208 465 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 PPP1R26Q5T8A7 1209 aaPredicted RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 HES3Q5TGS1 186 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 RSRC2Q7L4I2 434 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ZNF276Q8N554 614 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 EID2Q8N6I1 236 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 GANCQ8TET4 914 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 SLC6A18Q96N87 628 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CDK5RAP1Q96SZ6 601 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ORAI3Q9BRQ5 295 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ACE2Q9BYF1 805 aaPredicted RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 SLC2A11Q9BYW1 496 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CUEDC2Q9H467 287 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 MTG2Q9H4K7 406 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 SGK2Q9HBY8 427 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 ABCB8Q9NUT2 735 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CGNQ9P2M7 1197 aaKnown RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 PCDHGA1Q9Y5H4 931 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 WASF2Q9Y6W5 498 aa9.6□□□□□ -0.87
PTPN20-216ENST00000506080 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
PTPN20-216ENST00000506080 CYSRT1A8MQ03 144 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 VILLO15195 856 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 PAPSS1O43252 624 aaPredicted RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 DFNA5O60443 496 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 WNT1P04628 370 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 AFMP43652 599 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 ACADVLP49748 655 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 RACK1P63244 317 aaKnown RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 INCA1Q0VD86 236 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 CCDC173Q0VFZ6 552 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 SHBQ15464 509 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 TTC31Q49AM3 519 aaPredicted RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 MPPE1Q53F39 396 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 KIAA0895LQ68EN5 471 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 CNNM4Q6P4Q7 775 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 FAM217AQ8IXS0 508 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 IQUBQ8NA54 791 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 LINC00301Q8NCQ3 95 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 WFIKKN2Q8TEU8 576 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 TAF4BQ92750 862 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 ELF4Q99607 663 aaPredicted RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 DUSP16Q9BY84 665 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 APOBEC3GQ9HC16 384 aaKnown RBP9.59□□□□□ -0.87
PTPN20-216ENST00000506080 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 GGA2Q9UJY4 613 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 KNTC1P50748 2209 aa9.59□□□□□ -0.87
PTPN20-216ENST00000506080 A0A1W2PPC4 97 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 CAPN9O14815 690 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 SPTLC2O15270 562 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 PLXNA2O75051 1894 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 PABPC1P11940 636 aaKnown RBP9.58□□□□□ -0.88
PTPN20-216ENST00000506080 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
PTPN20-216ENST00000506080 SGSHP51688 502 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 YWHAGP61981 247 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTPN20-216ENST00000506080 CXADRP78310 365 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 BNIP3Q12983 259 aa9.58□□□□□ -0.88
PTPN20-216ENST00000506080 CUL4AQ13619 759 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms