RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 LVRNQ6Q4G3 990 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 Q6ZPA2 131 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF627Q7L945 461 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 GRASPQ7Z6J2 395 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 PAF1Q8N7H5 531 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 C12orf76Q8N812 135 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM71DQ8N9W8 422 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 OR52L2PQ8NGH6 319 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 CSGALNACT1Q8TDX6 532 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 NPIPB3Q92617 1050 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 GOLGA1Q92805 767 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRR11Q96HE9 360 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 YY1AP1Q9H869 796 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 RIC8AQ9NPQ8 531 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 VPS45Q9NRW7 570 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 ST3GAL5Q9UNP4 418 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 PCDHB2Q9Y5E7 798 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 NCANO14594 1321 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 WDR62O43379 1518 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 NUP160Q12769 1436 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 RRN3P2A6NIE6 340 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 SH3BP5O60239 455 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 KRT38O76015 456 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 PDE8BO95263 885 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 MBD3O95983 291 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 TPM3P06753 285 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 CKMT1AP12532 417 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 TACR2P21452 398 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 FPR3P25089 353 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 DUSP1P28562 367 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 RARRES1P49788 294 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 RBM6P78332 1123 aaKnown RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 GPC5P78333 572 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 SIM1P81133 766 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 CFHR3Q02985 330 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 PUM1Q14671 1186 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM153CQ494X1 144 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 RNASE12Q5GAN4 147 aaKnown RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 ANKRD40Q6AI12 368 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 ANKS1BQ7Z6G8 1248 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 LRRTM4Q86VH4 590 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 TMEM57Q8N5G2 664 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 IL17REQ8NFR9 667 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 GLMPQ8WWB7 406 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 NEU4Q8WWR8 484 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 EDC3Q96F86 508 aaKnown RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 TIGD1Q96MW7 591 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 SNX18Q96RF0 628 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 UBA5Q9GZZ9 404 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 USP29Q9HBJ7 922 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 TFCP2L1Q9NZI6 479 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 BCCIPQ9P287 314 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 CGNQ9P2M7 1197 aaKnown RBP4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 ANAPC4Q9UJX5 808 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 KCND3Q9UK17 655 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 PACSIN3Q9UKS6 424 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 BAG5Q9UL15 447 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 LZTS1Q9Y250 596 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 CLTCL1P53675 1640 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 MYOM1P52179 1685 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 KIAA0586Q9BVV6 1533 aa4.92□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM90A20PA6NIJ5 464 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 MBD3L5A6NJ08 208 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 M0QYT0 321 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CLGNO14967 610 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 FOXN1O15353 648 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRAMEF2O60811 474 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 FZD7O75084 574 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 PYGLP06737 847 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 KRT4P19013 534 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 GALNSP34059 522 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 JAK3P52333 1124 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 RPL15P61313 204 aaKnown RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 RAE1P78406 368 aaKnown RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 TLE3Q04726 772 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SYCP1Q15431 976 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 C16orf89Q6UX73 402 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SYT13Q7L8C5 426 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SLC29A4Q7RTT9 530 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 RASAL3Q86YV0 1011 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 LINC01465Q8N7H1 131 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 AMER2Q8N7J2 671 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 TERB1Q8NA31 727 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM184AQ8NB25 1140 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SIMC1Q8NDZ2 872 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SLC2A12Q8TD20 617 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 HERVK_113Q902F9 699 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 SNX21Q969T3 373 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 COG8Q96MW5 612 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 MMS19Q96T76 1030 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 RNF26Q9BY78 433 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CIPCQ9C0C6 399 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CDCP1Q9H5V8 836 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CHODLQ9H9P2 273 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms