RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SYT13Q7L8C5 426 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 ADGRF3Q8IZF5 1079 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 TMEM57Q8N5G2 664 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 CLEC4CQ8WTT0 213 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 CCDC17Q96LX7 622 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 HS6ST2Q96MM7 605 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 TWNKQ96RR1 684 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 PIGSQ96S52 555 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 NOL12Q9UGY1 213 aaKnown RBP eCLIP5□□□□□ -1.61
CCDC54-201ENST00000261058 DERAQ9Y315 318 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 COPG1Q9Y678 874 aaKnown RBP5□□□□□ -1.61
CCDC54-201ENST00000261058 WIPF3A6NGB9 483 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 AGAP5A6NIR3 686 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 TTC34A8MYJ7 566 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 GCATO75600 419 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 SGPL1O95470 568 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 LATS1O95835 1130 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 RFPL3SP0C7P2 107 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 CYP2D6P10635 497 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 PEPDP12955 493 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 CHN1P15882 459 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 IDUAP35475 653 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 CCR5P51681 352 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 ELLP55199 621 aaPredicted RBP4.99□□□□□ -1.61
CCDC54-201ENST00000261058 TMED8Q6PL24 325 aaPredicted RBP4.99□□□□□ -1.61
CCDC54-201ENST00000261058 RANBP10Q6VN20 620 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 ARHGEF25Q86VW2 580 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 RFX6Q8HWS3 928 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 BOLLQ8N9W6 283 aaKnown RBP4.99□□□□□ -1.61
CCDC54-201ENST00000261058 USP38Q8NB14 1042 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 SEMA6DQ8NFY4 1073 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 GOLGA1Q92805 767 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 SENP7Q9BQF6 1050 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 RIC8AQ9NPQ8 531 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 TMEM160Q9NX00 188 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 C9orf78Q9NZ63 289 aaPredicted RBP4.99□□□□□ -1.61
CCDC54-201ENST00000261058 PCDHA10Q9Y5I2 948 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 COX11Q9Y6N1 276 aa4.99□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3DA0A087WVF3 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3IA0A087WXS9 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3EA0A087X179 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3KA0A087X1G2 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3BA6NDS4 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3FA6NER0 549 aaPredicted RBP4.98□□□□□ -1.61
CCDC54-201ENST00000261058 SAC3D1A6NKF1 404 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3LB9A6J9 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3HP0C7X1 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 CYP2A6P11509 494 aaPredicted RBP4.98□□□□□ -1.61
CCDC54-201ENST00000261058 MAPK9P45984 424 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 SLC37A1P57057 533 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TLE2Q04725 743 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 POU5F1BQ06416 359 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 PDCLQ13371 301 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 SEC23BQ15437 767 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 CTXN3Q4LDR2 81 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ALFQ53S48 1182 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 AWAT1Q58HT5 328 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ZNF484Q5JVG2 852 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ANKRD45Q5TZF3 282 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 PRAMEF17Q5VTA0 474 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3GQ6DHY5 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3CQ6IPX1 549 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 FBXO42Q6P3S6 717 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ZNF474Q6S9Z5 364 aaPredicted RBP4.98□□□□□ -1.61
CCDC54-201ENST00000261058 SERPINA13PQ6UXR4 307 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 TBC1D3Q8IZP1 549 aaPredicted RBP4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ADPRHL1Q8NDY3 354 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 SRFBP1Q8NEF9 429 aaKnown RBP4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ATP2A3Q93084 1043 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 HERC2P3Q9BVR0 1158 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 CHODLQ9H9P2 273 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 PLEKHA2Q9HB19 425 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 ASNSD1Q9NWL6 643 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 GGA3Q9NZ52 723 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 BAG5Q9UL15 447 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 DNAJC16Q9Y2G8 782 aa4.98□□□□□ -1.61
CCDC54-201ENST00000261058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.97□□□□□ -1.61
CCDC54-201ENST00000261058 RRHO14718 337 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 NPHP1O15259 732 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 SEPT4O43236 478 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 KRT38O76015 456 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 PAX3P23760 479 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 TUBA4AP68366 448 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 RNASELQ05823 741 aaKnown RBP4.97□□□□□ -1.61
CCDC54-201ENST00000261058 CHRNDQ07001 517 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 GLE1Q53GS7 698 aaKnown RBP4.97□□□□□ -1.61
CCDC54-201ENST00000261058 KIAA1324Q6UXG2 1013 aaKnown RBP4.97□□□□□ -1.61
CCDC54-201ENST00000261058 RTL10Q7L3V2 364 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 TFAP2DQ7Z6R9 452 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 TMTC1Q8IUR5 882 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 C8orf58Q8NAV2 365 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.97□□□□□ -1.61
CCDC54-201ENST00000261058 HASPINQ8TF76 798 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 COG8Q96MW5 612 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 GPR78Q96P69 363 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 ASB2Q96Q27 587 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 HTATIP2Q9BUP3 242 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 MRIQ9BWK5 157 aa4.97□□□□□ -1.61
CCDC54-201ENST00000261058 NUAK2Q9H093 628 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms