RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CXCR3P49682 368 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 TMEM196Q5HYL7 178 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 ARCQ7LC44 396 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 CHSY1Q86X52 802 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 FAM172AQ8WUF8 416 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 MSANTD3Q96H12 275 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 VCPIP1Q96JH7 1222 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 ZDHHC4Q9NPG8 344 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 DLGAP2Q9P1A6 1054 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PAGE1O75459 146 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 LATS1O95835 1130 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 TACR2P21452 398 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 IRAK1P51617 712 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CLCN5P51795 746 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 GALCP54803 685 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 SEC13P55735 322 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CCINQ13939 588 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PPP2R5DQ14738 602 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 SLC18A3Q16572 532 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 MS4A13Q5J8X5 152 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 DAB2IPQ5VWQ8 1189 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CIR1Q86X95 450 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PHTF2Q8N3S3 785 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 ATP6V0D2Q8N8Y2 350 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PGAP3Q96FM1 320 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 BTN2A3PQ96KV6 586 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CCDC42Q96M95 316 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 SIK2Q9H0K1 926 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 WDCPQ9H6R7 721 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PARVAQ9NVD7 372 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 RRN3Q9NYV6 651 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 STIM2Q9P246 746 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CACNG3O60359 315 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 TBL1XO60907 577 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CDC25BP30305 580 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PTPN9P43378 593 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 NUMBP49757 651 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 HDAC4P56524 1084 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 AMPD2Q01433 879 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 GAS6Q14393 721 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 CCDC185Q8N715 623 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 WFDC5Q8TCV5 224 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 TMA16Q96EY4 203 aaKnown RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 BTBD6Q96KE9 485 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PNKPQ96T60 521 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
RETREG3-203ENST00000585894 C2orf42Q9NWW7 574 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
RETREG3-203ENST00000585894 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 K7EQS6 105 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 ENDOD1O94919 500 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 KAT7O95251 611 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 F9P00740 461 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 CYBBP04839 570 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 SLC2A3P11169 496 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 PSMA2P25787 234 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 HOXC13P31276 330 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 ZNF143P52747 638 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-203ENST00000585894 MPPE1Q53F39 396 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 EMC10Q5UCC4 262 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 CENPIQ92674 756 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-203ENST00000585894 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 CLDN23Q96B33 292 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 NELL2Q99435 816 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
RETREG3-203ENST00000585894 ANKRD62A6NC57 917 aa13.06□□□□□ -0.32
RETREG3-203ENST00000585894 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
RETREG3-203ENST00000585894 RNF40O75150 1001 aa13.06□□□□□ -0.32
RETREG3-203ENST00000585894 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
RETREG3-203ENST00000585894 MYBL1P10243 752 aa13.06□□□□□ -0.32
RETREG3-203ENST00000585894 DGKGP49619 791 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms