RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 HJURPQ8NCD3 748 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-219ENST00000580540 SPACA7Q96KW9 195 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 GABRG3Q99928 467 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 DUSP15Q9H1R2 295 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-219ENST00000580540 SEMA4GQ9NTN9 838 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 ASNSD1Q9NWL6 643 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 DDIT4Q9NX09 232 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
SREBF1-219ENST00000580540 SIK3Q9Y2K2 1263 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 FRYLO94915 3013 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 SPAG17Q6Q759 2223 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 RALGAPA1Q6GYQ0 2036 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 GFRA2O00451 464 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF18P17022 549 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 GABRG2P18507 467 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 TGM1P22735 817 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 HLA-FP30511 346 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 SOX5P35711 763 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 STAT1P42224 750 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ID4P47928 161 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 RPS24P62847 133 aaKnown RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 NME3Q13232 169 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 STARD3Q14849 445 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 C2CD6Q53TS8 623 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 RAP1GAP2Q684P5 730 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CHST9Q7L1S5 443 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 C11orf74Q86VG3 221 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CHSY1Q86X52 802 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CCDC117Q8IWD4 279 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 LGI2Q8N0V4 545 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CFAP52Q8N1V2 620 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 FRMD1Q8N878 549 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ATP6V0D2Q8N8Y2 350 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 SLC20A1Q8WUM9 679 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 CPA5Q8WXQ8 436 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 DDX1Q92499 740 aaKnown RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 C18orf8Q96DM3 657 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 LOXL4Q96JB6 756 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ZC3H10Q96K80 434 aaKnown RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 SLC2A13Q96QE2 648 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 THAP10Q9P2Z0 257 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
SREBF1-219ENST00000580540 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
SREBF1-219ENST00000580540 ABCA7Q8IZY2 2146 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 SMTNL1A8MU46 457 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 GOLGA8SH3BPF8 625 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 TIMM44O43615 452 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 SYNCRIPO60506 623 aaKnown RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 EPN2O95208 641 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 PABPC1P11940 636 aaKnown RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 IL12RB1P42701 662 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 DHPSP49366 369 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 CREB5Q02930 508 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 LMNB2Q03252 620 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 BYSLQ13895 437 aaKnown RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF234Q14588 700 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 EIF4HQ15056 248 aaKnown RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 RSPO4Q2I0M5 234 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 MS4A13Q5J8X5 152 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 NAA35Q5VZE5 725 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 TMEM215Q68D42 235 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 KIAA1324Q6UXG2 1013 aaKnown RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 ZDHHC17Q8IUH5 632 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 MFN1Q8IWA4 741 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 OLIG1Q8TAK6 271 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 WFDC5Q8TCV5 224 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 EPS8L1Q8TE68 723 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 WFIKKN2Q8TEU8 576 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 CYB5D2Q8WUJ1 264 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 MYEOVQ96EZ4 313 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 BTN2A3PQ96KV6 586 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 PRICKLE1Q96MT3 831 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-219ENST00000580540 SLC6A17Q9H1V8 727 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 HSD3B7Q9H2F3 369 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 CALCOCO1Q9P1Z2 691 aa17.24■□□□□ 0.35
SREBF1-219ENST00000580540 LRRC10BA6NIK2 292 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 M0QYT0 321 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 NPC1O15118 1278 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 LRP3O75074 770 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 DAB1O75553 588 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 IGLV3-25P01717 112 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 SLC2A3P11169 496 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 NDUFV2P19404 249 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 ABCB4P21439 1286 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 TACR2P21452 398 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 CCR1P32246 355 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 CD70P32970 193 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 CDH5P33151 784 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-219ENST00000580540 NOS2P35228 1153 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 P2RY2P41231 377 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 JAM2P57087 298 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 E2F5Q15329 346 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 CSRP2Q16527 193 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 FNDC3BQ53EP0 1204 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms