RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 KIAA0391O15091 583 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ST8SIA5O15466 376 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SPINT1O43278 529 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 MSI1O43347 362 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CACNG3O60359 315 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 PRMT3O60678 531 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 PPP6R2O75170 966 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 NDUFS2O75306 463 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ATXN1LP0C7T5 689 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 FAM200BP0CF97 657 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 BMP2P12643 396 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 NCAM1P13591 858 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 PFKFB1P16118 471 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CORO1AP31146 461 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ATICP31939 592 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 EIF2DP41214 584 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 PPP3CCP48454 512 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 MFAP3P55082 362 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 AMPD3Q01432 767 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CENPCQ03188 943 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 LRMPQ12912 555 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 BMT2Q1RMZ1 405 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 COL28A1Q2UY09 1125 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ZACNQ401N2 412 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 DCAF12L1Q5VU92 463 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SNX30Q5VWJ9 437 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 FYB2Q5VWT5 728 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 LRSAM1Q6UWE0 723 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 Q6ZNB5 142 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 DDX42Q86XP3 938 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 NAXDQ8IW45 347 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CRYBG2Q8N1P7 616 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 PDZD8Q8NEN9 1154 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 UBA3Q8TBC4 463 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 WFDC5Q8TCV5 224 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 HEXIM2Q96MH2 286 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ZNF396Q96N95 335 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 BBC3Q96PG8 261 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CIPCQ9C0C6 399 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 GOLPH3LQ9H4A5 285 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC32A1Q9H598 525 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 C6orf106Q9H6K1 298 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CSNK1G1Q9HCP0 422 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 TLR8Q9NR97 1041 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 EXOC1Q9NV70 894 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 AGO1Q9UL18 857 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SCML2Q9UQR0 700 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 ATP8B3O60423 1300 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 CFAP46Q8IYW2 2715 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 FAM47DPA6NHR8 397 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 A6NJY4 79 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 GJB3O75712 270 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 YEATS4O95619 227 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 F13A1P00488 732 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ASS1P00966 412 aaKnown RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 CAPNS1P04632 268 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ACSL1P33121 698 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 CTSOP43234 321 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 RGS7P49802 495 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 TPMTP51580 245 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 VAMP7P51809 220 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 NDUFA8P51970 172 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 KIF11P52732 1056 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 COPAP53621 1224 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ZNF234Q14588 700 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 SGSM1Q2NKQ1 1148 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 PEAR1Q5VY43 1037 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 RFWD3Q6PCD5 774 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 MMS22LQ6ZRQ5 1243 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 TRIM46Q7Z4K8 759 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 RAB44Q7Z6P3 723 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 TMPRSS6Q8IU80 811 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 C12orf56Q8IXR9 622 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC4A11Q8NBS3 891 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 OVCA2Q8WZ82 227 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ZNF419Q96HQ0 510 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 LRIG1Q96JA1 1093 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 TNIP3Q96KP6 325 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 HNRNPABQ99729 332 aaKnown RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 GABRG3Q99928 467 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ULBP1Q9BZM6 244 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 GAREM1Q9H706 876 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 WSB2Q9NYS7 404 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 EHD2Q9NZN4 543 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 DNMT3LQ9UJW3 386 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 LSM7Q9UK45 103 aaKnown RBP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 ZDHHC9Q9Y397 364 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 MSRB2Q9Y3D2 182 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 SNX11Q9Y5W9 270 aa7.17□□□□□ -1.26
PRPF40B-214ENST00000551320 FLNBO75369 2602 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms