RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 XPO7Q9UIA9 1087 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 CLEC4EQ9ULY5 219 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 SLC27A6Q9Y2P4 619 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 GOLGA6L7A0A1B0GV03 622 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 M0QYT0 321 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 SGK1O00141 431 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 GFRA3O60609 400 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 ADAM23O75077 832 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 HOXA6P31267 233 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 CCR1P32246 355 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 GBP1P32455 592 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 GSCP56915 257 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-206ENST00000465877 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
COL5A1-206ENST00000465877 NME3Q13232 169 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 GEN1Q17RS7 908 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 PIK3R6Q5UE93 754 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 EGFLAMQ63HQ2 1017 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 RAP1GAP2Q684P5 730 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 TRMT11Q7Z4G4 463 aaKnown RBP13.38□□□□□ -0.27
COL5A1-206ENST00000465877 IRF2BP2Q7Z5L9 587 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 LONP2Q86WA8 852 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 CAMKK1Q8N5S9 505 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 ATP6V0D2Q8N8Y2 350 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 WFDC5Q8TCV5 224 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 ATRIPQ8WXE1 791 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 NPY6RQ99463 290 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
COL5A1-206ENST00000465877 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 SLC2A11Q9BYW1 496 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL5A1-206ENST00000465877 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 DMXL1Q9Y485 3027 aa13.38□□□□□ -0.27
COL5A1-206ENST00000465877 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 KCNU1A8MYU2 1149 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TBL1XO60907 577 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 APBB3O95704 486 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TPM3P06753 285 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 SLC2A3P11169 496 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 HNRNPLP14866 589 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TFE3P19532 575 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ABCB4P21439 1286 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TACR2P21452 398 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 HLA-FP30511 346 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PRKCIP41743 596 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 EIF4HQ15056 248 aaKnown RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 CRY1Q16526 586 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ARCQ7LC44 396 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 WDR5BQ86VZ2 330 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PHF13Q86YI8 300 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 RNF214Q8ND24 703 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 KCNV2Q8TDN2 545 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 RNF34Q969K3 372 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 NT5C3BQ969T7 300 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TBCBQ99426 244 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 PIGVQ9NUD9 493 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 TMEM59LQ9UK28 342 aa13.37□□□□□ -0.27
COL5A1-206ENST00000465877 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
COL5A1-206ENST00000465877 NUP205Q92621 2012 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CCDC163A0A0D9SF12 145 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 A0A1W2PQJ5 194 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 F5H5T6 163 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 GJB6O95452 261 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 LMNAP02545 664 aaKnown RBP13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CALB1P05937 261 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 HOXB2P14652 356 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 NTSR1P30989 418 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 DGKEP52429 567 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 RPS24P62847 133 aaKnown RBP13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CDH18Q13634 790 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 MPP7Q5T2T1 576 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 ANO7Q6IWH7 933 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms