RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 DPH5Q9H2P9 285 aa20.89■□□□□ 0.94
VRK2-207ENST00000440705 NEU2Q9Y3R4 380 aa20.89■□□□□ 0.94
VRK2-207ENST00000440705 HBS1LQ9Y450 684 aaKnown RBP20.89■□□□□ 0.94
VRK2-207ENST00000440705 SLC12A8A0AV02 714 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 SGK1O00141 431 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 C8AP07357 584 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 MYBL2P10244 700 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 STIP1P31948 543 aaKnown RBP20.89■□□□□ 0.93
VRK2-207ENST00000440705 XRCC4Q13426 336 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 HLTFQ14527 1009 aaKnown RBP eCLIP20.89■□□□□ 0.93
VRK2-207ENST00000440705 TRADDQ15628 312 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 PDZD4Q76G19 769 aaPredicted RBP20.89■□□□□ 0.93
VRK2-207ENST00000440705 SPRED2Q7Z698 418 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 ELMOD1Q8N336 334 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 ATP6V0D2Q8N8Y2 350 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 SIK2Q9H0K1 926 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 ASIC3Q9UHC3 531 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 NFU1Q9UMS0 254 aa20.89■□□□□ 0.93
VRK2-207ENST00000440705 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.88■□□□□ 0.93
VRK2-207ENST00000440705 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.88■□□□□ 0.93
VRK2-207ENST00000440705 H3BNC9 293 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 H7C0C1 242 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 LRIG2O94898 1065 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 CSPG5O95196 566 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 IGLV3-27P01718 113 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 KRT14P02533 472 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 ATP5OP48047 213 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 CLCN4P51793 760 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 NRG1Q02297 640 aaPredicted RBP20.88■□□□□ 0.93
VRK2-207ENST00000440705 CAMK1Q14012 370 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 BEND6Q5SZJ8 279 aaPredicted RBP20.88■□□□□ 0.93
VRK2-207ENST00000440705 DARS2Q6PI48 645 aaKnown RBP20.88■□□□□ 0.93
VRK2-207ENST00000440705 DDX42Q86XP3 938 aaKnown RBP eCLIP20.88■□□□□ 0.93
VRK2-207ENST00000440705 RSAD2Q8WXG1 361 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 BTN2A3PQ96KV6 586 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 SNX24Q9Y343 169 aa20.88■□□□□ 0.93
VRK2-207ENST00000440705 MTCL1Q9Y4B5 1905 aaKnown RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 DCLK1O15075 740 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 MOCS2O96007 188 aaPredicted RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 ERCC2P18074 760 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 EPHB2P29323 1055 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 RPL21P46778 160 aaKnown RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 MLLT6P55198 1093 aaPredicted RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 GPM6BQ13491 265 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 PAFAH1B3Q15102 231 aaKnown RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 NUGGCQ68CJ6 796 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 EMBQ6PCB8 327 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 ZC3H18Q86VM9 953 aaKnown RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 UNC45BQ8IWX7 931 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 GDF15Q99988 308 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 FAM129AQ9BZQ8 928 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 ETNK2Q9NVF9 386 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 YBX2Q9Y2T7 364 aaKnown RBP20.87■□□□□ 0.93
VRK2-207ENST00000440705 RAD54BQ9Y620 910 aa20.87■□□□□ 0.93
VRK2-207ENST00000440705 CFAP69A5D8W1 941 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 COCHO43405 550 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 F11P03951 625 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 COG7P83436 770 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 GBE1Q04446 702 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 PPM1LQ5SGD2 360 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 GSPT2Q8IYD1 628 aaKnown RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 AENQ8WTP8 325 aaKnown RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 DTLQ9NZJ0 730 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 MSRAQ9UJ68 235 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 SNX10Q9Y5X0 201 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 HS3ST4Q9Y661 456 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 LAMA2P24043 3122 aaKnown RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 ITIH2P19823 946 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 IRS1P35568 1242 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 ADCY8P40145 1251 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 SLC10A2Q12908 348 aaPredicted RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 CALCOCO2Q13137 446 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 TRIP13Q15645 432 aaPredicted RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 RAB30Q15771 203 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 KCTD19Q17RG1 926 aaPredicted RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 BBOF1Q8ND07 529 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 SNF8Q96H20 258 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 PCDH9Q9HC56 1237 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 ZNF334Q9HCZ1 680 aaPredicted RBP20.86■□□□□ 0.93
VRK2-207ENST00000440705 WHRNQ9P202 907 aa20.86■□□□□ 0.93
VRK2-207ENST00000440705 BCLAF3A2AJT9 711 aaKnown RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 HACD1B0YJ81 288 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 FGF10O15520 208 aaPredicted RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 OAS1P00973 400 aaKnown RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 HMBSP08397 361 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 HOXC13P31276 330 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 SERPINB6P35237 376 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 PBX2P40425 430 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 MANEALQ5VSG8 457 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 RWDD4Q6NW29 188 aaKnown RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 TMEM150AQ86TG1 271 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 CDKL3Q8IVW4 592 aaPredicted RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 TBC1D31Q96DN5 1066 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 PBX4Q9BYU1 374 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 CATSPERBQ9H7T0 1116 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 IL21Q9HBE4 155 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 DPP7Q9UHL4 492 aa20.85■□□□□ 0.93
VRK2-207ENST00000440705 XPO7Q9UIA9 1087 aaKnown RBP20.85■□□□□ 0.93
VRK2-207ENST00000440705 ANAPC1Q9H1A4 1944 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms