RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 NAA50Q9GZZ1 169 aaKnown RBP19.27■□□□□ 0.68
PRDM1-202ENST00000369091 PNPLA3Q9NST1 481 aa19.27■□□□□ 0.68
PRDM1-202ENST00000369091 CORINQ9Y5Q5 1042 aa19.27■□□□□ 0.68
PRDM1-202ENST00000369091 APOEP02649 317 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 PIK3R1P27986 724 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 AARS2Q5JTZ9 985 aaKnown RBP19.26■□□□□ 0.67
PRDM1-202ENST00000369091 SLC9A4Q6AI14 798 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 NIPAL1Q6NVV3 410 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 MPP5Q8N3R9 675 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 LRTOMTQ8WZ04 291 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 HIPK3Q9H422 1215 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 RPF2Q9H7B2 306 aaKnown RBP19.26■□□□□ 0.67
PRDM1-202ENST00000369091 SLC9A2Q9UBY0 812 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 PCSK1NQ9UHG2 260 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 PRPF19Q9UMS4 504 aaKnown RBP19.26■□□□□ 0.67
PRDM1-202ENST00000369091 SOBPA7XYQ1 873 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 GIPC1O14908 333 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 UFL1O94874 794 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 MAPK10P53779 464 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 SOX10P56693 466 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 IGBP1P78318 339 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 IKBKEQ14164 716 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 RWDD4Q6NW29 188 aaKnown RBP19.26■□□□□ 0.67
PRDM1-202ENST00000369091 LYSMD3Q7Z3D4 306 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 FAM47BQ8NA70 645 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 KYQ8NBH2 561 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 CHPT1Q8WUD6 406 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF597Q96LX8 424 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 WDR11Q9BZH6 1224 aa19.26■□□□□ 0.67
PRDM1-202ENST00000369091 DHX33Q9H6R0 707 aaKnown RBP19.26■□□□□ 0.67
PRDM1-202ENST00000369091 TCRBV5S1A1TA0A578 114 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 H3BMQ9 156 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 MCF2LO15068 1137 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 PLIN3O60664 434 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 BMP10O95393 424 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 CAPNS1P04632 268 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SERPINB2P05120 415 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 INHBBP09529 407 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 OSBPP22059 807 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 KDELR1P24390 212 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SLC25A11Q02978 314 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 FSCBQ5H9T9 825 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 TDRD10Q5VZ19 366 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 METTL21CQ5VZV1 264 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SNRNP48Q6IEG0 339 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 MIER3Q7Z3K6 550 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SETD3Q86TU7 594 aaPredicted RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 CAND1Q86VP6 1230 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF781Q8N8C0 355 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 TANKQ92844 425 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 COG8Q96MW5 612 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 ACSS2Q9NR19 701 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 NEMP1O14524 444 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 ITGBL1O95965 494 aaPredicted RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 PSMA2P25787 234 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 ADORA2AP29274 412 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 RCVRNP35243 200 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 ABCE1P61221 599 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 MMRN1Q13201 1228 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 CUL2Q13617 745 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 NR1D2Q14995 579 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 GPR107Q5VW38 600 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 C16orf89Q6UX73 402 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SIAH1Q8IUQ4 282 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 DEPDC1BQ8WUY9 529 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 EIF2AQ9BY44 585 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 CLK4Q9HAZ1 481 aaKnown RBP19.25■□□□□ 0.67
PRDM1-202ENST00000369091 VPS45Q9NRW7 570 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 PTPRJQ12913 1337 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 CROCCQ5TZA2 2017 aa19.25■□□□□ 0.67
PRDM1-202ENST00000369091 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 MYL4P12829 197 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ROR1Q01973 937 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 AOC3Q16853 763 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ZBED5Q49AG3 693 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 MTX3Q5HYI7 312 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TMEM26Q6ZUK4 368 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 KIAA0319LQ8IZA0 1049 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TMEM161BQ8NDZ6 487 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 AGAP3Q96P47 875 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 SACM1LQ9NTJ5 587 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 CDH7Q9ULB5 785 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TPP1O14773 563 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 GNPATO15228 680 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ZC3H11AO75152 810 aaKnown RBP eCLIP19.24■□□□□ 0.67
PRDM1-202ENST00000369091 SULT1C4O75897 302 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 MAP3K6O95382 1288 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 PRKCGP05129 697 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 BMXP51813 675 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 PSMC1P62191 440 aaKnown RBP19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ESRRGP62508 458 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 GTF2IP78347 998 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 STARD8Q92502 1023 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
PRDM1-202ENST00000369091 ITPKCQ96DU7 683 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 CIB1Q99828 191 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 WDR55Q9H6Y2 383 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms