RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 METTL5Q9NRN9 209 aaKnown RBP17.9■□□□□ 0.46
PHGDH-234ENST00000642041 SSX2IPQ9Y2D8 614 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 COL4A3Q01955 1670 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 SMAPO00193 183 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 TEX28O15482 410 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 GDF9O60383 454 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 ECEL1O95672 775 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 F9P00740 461 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CALCAP01258 141 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CD72P21854 359 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 COILP38432 576 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 OR1G1P47890 313 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 RNASE9P60153 205 aaKnown RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 PFKPQ01813 784 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 GUCY2DQ02846 1103 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 YWHAHQ04917 246 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CYP4A22Q5TCH4 519 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 ALS2CLQ60I27 953 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 OVOS1Q6IE37 1185 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 PMF1Q6P1K2 205 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 FAM171BQ6P995 826 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CCDC137Q6PK04 289 aaKnown RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 PARM1Q6UWI2 310 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 BZW1Q7L1Q6 419 aaKnown RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 TTC30AQ86WT1 665 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 SIX6OS1Q8N1H7 587 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CCDC89Q8N998 374 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 SLC2A14Q8TDB8 520 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 AP1M1Q9BXS5 423 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 FOXP3Q9BZS1 431 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 PLEKHA4Q9H4M7 779 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 EPB41L5Q9HCM4 733 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CSNK1G1Q9HCP0 422 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 MTRF1LQ9UGC7 380 aaKnown RBP17.89■□□□□ 0.45
PHGDH-234ENST00000642041 CYTH4Q9UIA0 394 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 ZMIZ1Q9ULJ6 1067 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 IGF2RP11717 2491 aa17.89■□□□□ 0.45
PHGDH-234ENST00000642041 MTCL1Q9Y4B5 1905 aaKnown RBP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 OR6C75A6NL08 312 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 C2CD2LO14523 706 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 MAP2K7O14733 419 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 MDM4O15151 490 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 RAD51CO43502 376 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 DDHD2O94830 711 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 OAZ2O95190 189 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 C1RP00736 705 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 URODP06132 367 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 TDGF1P13385 188 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 LMO2P25791 158 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 NOS2P35228 1153 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 HSP90B2PQ58FF3 399 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 INTS6LQ5JSJ4 861 aaKnown RBP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 ZNF280BQ86YH2 543 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 MREGQ8N565 214 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 C2orf15Q8WU43 125 aaKnown RBP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 RXFP2Q8WXD0 754 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 PRKD2Q9BZL6 878 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 RXFP1Q9HBX9 757 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 FAM49BQ9NUQ9 324 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 COMMD8Q9NX08 183 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 ZDHHC7Q9NXF8 308 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 RCOR3Q9P2K3 495 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
PHGDH-234ENST00000642041 DOCK6Q96HP0 2047 aa17.88■□□□□ 0.45
PHGDH-234ENST00000642041 BHMG1C9JSJ3 638 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 F8VP50 259 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 H7C4K7 107 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 B4GALT3O60512 393 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 LRCH4O75427 683 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 TADA2AO75478 443 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 SOD2P04179 222 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 KRT1P04264 644 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 ITIH2P19823 946 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 TARSP26639 723 aaKnown RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 ADORA2BP29275 332 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 MATKP42679 507 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 YWHAZP63104 245 aaKnown RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 CALCOCO2Q13137 446 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 MTA1Q13330 715 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 ZNF211Q13398 564 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 C4orf22Q6V702 233 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 FAM183BPQ6ZVS7 135 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 FUKQ8N0W3 1084 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 TMEM130Q8N3G9 435 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 PRELID2Q8N945 189 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 KDF1Q8NAX2 398 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 KCTD6Q8NC69 237 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 SLITRK1Q96PX8 696 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 DDX47Q9H0S4 455 aaKnown RBP17.87■□□□□ 0.45
PHGDH-234ENST00000642041 MED4Q9NPJ6 270 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
PHGDH-234ENST00000642041 TM4SF5O14894 197 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 TRUB2O95900 331 aaKnown RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FSHRP23945 695 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 LIMK1P53667 647 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FAM193AP78312 1265 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms