RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 THAP2Q9H0W7 228 aa15.54■□□□□ 0.08
CDC42SE1-203ENST00000470278 HPS4Q9NQG7 708 aa15.54■□□□□ 0.08
CDC42SE1-203ENST00000470278 SPTLC3Q9NUV7 552 aa15.54■□□□□ 0.08
CDC42SE1-203ENST00000470278 DDIT4Q9NX09 232 aa15.54■□□□□ 0.08
CDC42SE1-203ENST00000470278 WNT6Q9Y6F9 365 aa15.54■□□□□ 0.08
CDC42SE1-203ENST00000470278 M0QYT0 321 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 ENDOD1O94919 500 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 NFATC1O95644 943 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 F9P00740 461 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 CYP1A2P05177 515 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 SLC2A3P11169 496 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 PDGFRAP16234 1089 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 ABCB4P21439 1286 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 GPD1P21695 349 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 SDC4P31431 198 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 SULT1E1P49888 294 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 ZNF143P52747 638 aaPredicted RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 GALCP54803 685 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 RPL7AP62424 266 aaKnown RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 PPP2R5DQ14738 602 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 DCUN1D2Q6PH85 259 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 STRADAQ7RTN6 431 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 CCDC105Q8IYK2 499 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 RXFP2Q8WXD0 754 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 CENPIQ92674 756 aaPredicted RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 MSANTD3Q96H12 275 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 ZFYVE19Q96K21 471 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 TBCBQ99426 244 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 IRX2Q9BZI1 471 aaPredicted RBP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 WNT16Q9UBV4 365 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 INTUQ9ULD6 942 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 PAXBP1Q9Y5B6 917 aa15.53■□□□□ 0.08
CDC42SE1-203ENST00000470278 TMEM191CA6NGB0 347 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 GJB6O95452 261 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 APOEP02649 317 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 HMBSP08397 361 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 H2AFZP0C0S5 128 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 GLULP15104 373 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 TFE3P19532 575 aaPredicted RBP15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CCR1P32246 355 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CXCR3P49682 368 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 RUNX3Q13761 415 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CCDC14Q49A88 953 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 BRMS1LQ5PSV4 323 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 TRIM68Q6AZZ1 485 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 H2AFVQ71UI9 128 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 ADGRG2Q8IZP9 1017 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 SIX5Q8N196 739 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CPXM2Q8N436 756 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CPA6Q8N4T0 437 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CTNNBL1Q8WYA6 563 aaPredicted RBP15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 CNPY3Q9BT09 278 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 EBF3Q9H4W6 596 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 PIGVQ9NUD9 493 aa15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 AGO1Q9UL18 857 aaKnown RBP15.52■□□□□ 0.08
CDC42SE1-203ENST00000470278 KIAA1549LQ6ZVL6 1849 aa15.52■□□□□ 0.07
CDC42SE1-203ENST00000470278 SPTBN2O15020 2390 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 KCNU1A8MYU2 1149 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 GFRA2O00451 464 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 NDUFA10O95299 355 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ADH1CP00326 375 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 CYP17A1P05093 508 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ARSAP15289 507 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 DESP17661 470 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 CHKAP35790 457 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 SLC11A2P49281 568 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 DEUP1Q05D60 604 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 TNK2Q07912 1038 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 NME3Q13232 169 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ITPRIPL2Q3MIP1 535 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 C1orf228Q6PIY5 440 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 SND1Q7KZF4 910 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 DENND1CQ8IV53 801 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 CCDC112Q8NEF3 446 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 FLCNQ8NFG4 579 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 CSGALNACT1Q8TDX6 532 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 PDLIM2Q96JY6 352 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 BTN2A3PQ96KV6 586 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 PACSIN1Q9BY11 444 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 IRF2BPLQ9H1B7 796 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 LINC00597Q9H2U6 94 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ARHGEF3Q9NR81 526 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 ARHGEF38Q9NXL2 777 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 GTSE1Q9NYZ3 720 aa15.51■□□□□ 0.07
CDC42SE1-203ENST00000470278 MARK1Q9P0L2 795 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms