RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 ACSL1P33121 698 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 ME1P48163 572 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 RAD23BP54727 409 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 PTPRNQ16849 979 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 CEP135Q66GS9 1140 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 ARHGAP17Q68EM7 881 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 C19orf48Q6RUI8 117 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 ANKS1BQ7Z6G8 1248 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 ADIPOR2Q86V24 386 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 PIGZQ86VD9 579 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 MDM1Q8TC05 714 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 PRCCQ92733 491 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 FAXDC2Q96IV6 333 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 CCDC86Q9H6F5 360 aaKnown RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.2
SRRT-206ENST00000460194 ARID1BQ8NFD5 2236 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
SRRT-206ENST00000460194 A0A1B0GVT2 93 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 TULP2O00295 520 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 TIMM44O43615 452 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 CER1O95813 267 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 MYL1P05976 194 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 EPHX1P07099 455 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 HMBSP08397 361 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 MATKP42679 507 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 CSNK1EP49674 416 aaKnown RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 DNM1Q05193 864 aaKnown RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 PDE4CQ08493 712 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 KIF19Q2TAC6 998 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 COL28A1Q2UY09 1125 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 ZNF394Q53GI3 561 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 KCNT1Q5JUK3 1230 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 IL27RAQ6UWB1 636 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 INTS8Q75QN2 995 aaKnown RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 PDZD3Q86UT5 571 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 CEP57L1Q8IYX8 460 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.82□□□□□ -0.2
SRRT-206ENST00000460194 OR2T3Q8NH03 318 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 UCMAQ8WVF2 138 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 NDRG1Q92597 394 aaKnown RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 SNX21Q969T3 373 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 ARID3AQ99856 593 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 C6orf106Q9H6K1 298 aaPredicted RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 TMEM8AQ9HCN3 771 aa13.82□□□□□ -0.2
SRRT-206ENST00000460194 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.82□□□□□ -0.2
SRRT-206ENST00000460194 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 SLC12A8A0AV02 714 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 FLRT2O43155 660 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 CALUO43852 315 aaPredicted RBP13.81□□□□□ -0.2
SRRT-206ENST00000460194 SYNCRIPO60506 623 aaKnown RBP13.81□□□□□ -0.2
SRRT-206ENST00000460194 TSPAN3O60637 253 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 CLSTN1O94985 981 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 HLA-EP13747 358 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 PFKFB1P16118 471 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 CMA1P23946 247 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 NR2F2P24468 414 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 YWHAGP61981 247 aaKnown RBP eCLIP13.81□□□□□ -0.2
SRRT-206ENST00000460194 MARCH9Q86YJ5 346 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 ANKRD52Q8NB46 1076 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
SRRT-206ENST00000460194 PLD4Q96BZ4 506 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 MYO19Q96H55 970 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 HEXIM2Q96MH2 286 aaKnown RBP13.81□□□□□ -0.2
SRRT-206ENST00000460194 CISHQ9NSE2 258 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 MYLKQ15746 1914 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 DOCK9Q9BZ29 2069 aa13.81□□□□□ -0.2
SRRT-206ENST00000460194 SHROOM3Q8TF72 1996 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 A0A1B0GVL5 298 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 GABBR2O75899 941 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 ZBED1O96006 694 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 GTF2H1P32780 548 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 SGSHP51688 502 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 TKTL1P51854 596 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 DPYDQ12882 1025 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 PKDCCQ504Y2 493 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 KRT39Q6A163 491 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 ARHGAP18Q8N392 663 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 TATDN2Q93075 761 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
SRRT-206ENST00000460194 CIPCQ9C0C6 399 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms