RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ZSWIM5Q9P217 1185 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ENPP5Q9UJA9 477 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 MYO3BQ8WXR4 1341 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ERVH48-1M5A8F1 160 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 SPOPO43791 374 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 RFPL2O75678 378 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 UGT2B4P06133 528 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF26P17031 533 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 GARTP22102 1010 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 KRT20P35900 424 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 OPRL1P41146 370 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 CASP3P42574 277 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 KCNJ1P48048 391 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 CDH15P55291 814 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 OTUD4Q01804 1114 aaKnown RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 IRF5Q13568 498 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 RAB39AQ14964 217 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 NPY5RQ15761 445 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ZYXQ15942 572 aaKnown RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 PXDC1Q5TGL8 231 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 AADACL2Q6P093 401 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ERAP2Q6P179 960 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 PIK3AP1Q6ZUJ8 805 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 TMEM26Q6ZUK4 368 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 FKBP9P1Q75LS8 142 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 TRIM59Q8IWR1 403 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 COLGALT2Q8IYK4 626 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 FIG4Q92562 907 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 DLG3Q92796 817 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF560Q96MR9 790 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 MTMR12Q9C0I1 747 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 DPEP3Q9H4B8 488 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 GPN2Q9H9Y4 310 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 PLEKHA5Q9HAU0 1116 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 AKIP1Q9NQ31 210 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 STRIP2Q9ULQ0 834 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 MAGEB16A2A368 324 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 GAS7O60861 476 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 DEAF1O75398 565 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 NADKO95544 446 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ICAM2P13598 275 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 KCNQ4P56696 695 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 TRPC3Q13507 836 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 DNASE1L3Q13609 305 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 GALNT3Q14435 633 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 HSF5Q4G112 596 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 SNAP47Q5SQN1 464 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
LINC00342-202ENST00000448494 HPS6Q86YV9 775 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 LACC1Q8IV20 430 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 C7orf57Q8NEG2 295 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 TMEM79Q9BSE2 394 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 C1QTNF7Q9BXJ2 289 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 IGSF5Q9NSI5 407 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 ALG6Q9Y672 507 aa11.04□□□□□ -0.64
LINC00342-202ENST00000448494 MYH3P11055 1940 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 NMT2O60551 498 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 GFAPP14136 432 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 UCHL3P15374 230 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 CENPAP49450 140 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 ALDH18A1P54886 795 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 EIF3EP60228 445 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 OLR1P78380 273 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 COASYQ13057 564 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TCEAL1Q15170 157 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TAF5Q15542 800 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TCHHL1Q5QJ38 904 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 RSBN1Q5VWQ0 802 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 C15orf52Q6ZUT6 534 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 ZCCHC9Q8N567 271 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 ABHD11Q8NFV4 315 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TOE1Q96GM8 510 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 AK8Q96MA6 479 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 EYA1Q99502 592 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 POP1Q99575 1024 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 C17orf62Q9BQA9 187 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 VPS37BQ9H9H4 285 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 PSME2Q9UL46 239 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 NALCNQ8IZF0 1738 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 PRSS51A0A1B0GVH4 220 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 A0A1W2PQ72 361 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 I3L4J1 428 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 EYA2O00167 538 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 HDAC3O15379 428 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SORBS2O94875 1100 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms