RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 COG4Q9H9E3 785 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS52-212ENST00000445902 FAIMQ9NVQ4 179 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CCPG1Q9ULG6 757 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 SSX2IPQ9Y2D8 614 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 CHADO15335 359 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 BBOX1O75936 387 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CSPG5O95196 566 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 ENO3P13929 434 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 GABRB2P47870 512 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 SLC10A2Q12908 348 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 PDE1CQ14123 709 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 PPP2R5DQ14738 602 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CDO1Q16878 200 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CRY2Q49AN0 593 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 NIPA2Q8N8Q9 360 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 NLRP7Q8WX94 980 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 PLK2Q9NYY3 685 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 ZNF195O14628 629 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 ALDOAP04075 364 aaKnown RBP14.36□□□□□ -0.11
VPS52-212ENST00000445902 PSMC3P17980 439 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
VPS52-212ENST00000445902 CD97P48960 835 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 NCCRP1Q6ZVX7 275 aaPredicted RBP14.36□□□□□ -0.11
VPS52-212ENST00000445902 ZNF781Q8N8C0 355 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.36□□□□□ -0.11
VPS52-212ENST00000445902 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 OR52B2Q96RD2 323 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 PEBP4Q96S96 227 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 IMPG2Q9BZV3 1241 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 GPATCH2LQ9NWQ4 482 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 GABBR1Q9UBS5 961 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 NR2E3Q9Y5X4 410 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 WDR81Q562E7 1941 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 ARID2Q68CP9 1835 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 PLIN3O60664 434 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 OATP04181 439 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 SERPINB2P05120 415 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 SERPINE1P05121 402 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 COL6A2P12110 1019 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 MLH1P40692 756 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 UBR7Q8N806 425 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 MARK4Q96L34 752 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
VPS52-212ENST00000445902 PCDH18Q9HCL0 1135 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 DNAJC28Q9NX36 388 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 THEGQ9P2T0 379 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 RNF11Q9Y3C5 154 aa14.36□□□□□ -0.11
VPS52-212ENST00000445902 PPEF1O14829 653 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 LYPLA2O95372 231 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 P4HA1P13674 534 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 MYL6P60660 151 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 NOMO1Q15155 1222 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 ERI1Q8IV48 349 aaKnown RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 SAMD3Q8N6K7 520 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 ERLEC1Q96DZ1 483 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 KLHL32Q96NJ5 620 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 POLR3FQ9H1D9 316 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 MKS1Q9NXB0 559 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 TMEM216Q9P0N5 145 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 SEPT9Q9UHD8 586 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 USP18Q9UMW8 372 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 RGL2O15211 777 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 RALBP11234 206 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 TCF7P36402 384 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 ZNF132P52740 706 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 NDST2P52849 883 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 BSPRYQ5W0U4 402 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 DSELQ8IZU8 1212 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 EME1Q96AY2 570 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 RCN3Q96D15 328 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 MASTLQ96GX5 879 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 ZDHHC15Q96MV8 337 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 MSTO1Q9BUK6 570 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 TARS2Q9BW92 718 aaKnown RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
VPS52-212ENST00000445902 BARX2Q9UMQ3 279 aaPredicted RBP14.35□□□□□ -0.11
VPS52-212ENST00000445902 PSAT1Q9Y617 370 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms