RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
SMARCA1-201ENST00000371121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 H3BNH8 94 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 CCNE2O96020 404 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 GALNT2Q10471 571 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TCP10Q12799 353 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ITPRIPL1Q6GPH6 555 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 OGFOD2Q6N063 350 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 GPR180Q86V85 440 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 RNF148Q8N7C7 305 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 FAM156AQ8NDB6 213 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 PGLYRP2Q96PD5 576 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 RRN3Q9NYV6 651 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 NR2E3Q9Y5X4 410 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TNK2Q07912 1038 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 HMBOX1Q6NT76 420 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TMEM53Q6P2H8 277 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ISOC1Q96CN7 298 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 NTPCRQ9BSD7 190 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 OSBPL6Q9BZF3 934 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 RMI1Q9H9A7 625 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 EXOC7Q9UPT5 735 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 CST3P01034 146 aaPredicted RBP12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ERBB2P04626 1255 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 IL4RP24394 825 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 KLF10Q13118 480 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 NRF1Q16656 503 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 PPM1JQ5JR12 505 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 EPGNQ6UW88 154 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 PATL1Q86TB9 770 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TMEM126BQ8IUX1 230 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF781Q8N8C0 355 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TSPAN14Q8NG11 270 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 TBC1D15Q8TC07 691 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 COG4Q9H9E3 785 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ACSS2Q9NR19 701 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
SMARCA1-201ENST00000371121 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 TRIM64A6NGJ6 449 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 SOBPA7XYQ1 873 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 PLIN3O60664 434 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 ENDOD1O94919 500 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 KLHL2O95198 593 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 GABRB2P47870 512 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 HARS2P49590 506 aaKnown RBP12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 CLCN2P51788 898 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 SLC5A3P53794 718 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 MLLT10P55197 1068 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 CNTN2Q02246 1040 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 C16orf72Q14CZ0 275 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 MAMDC4Q6UXC1 1216 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 LYSMD3Q7Z3D4 306 aa12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 HERC5Q9UII4 1024 aaKnown RBP12.02□□□□□ -0.48
SMARCA1-201ENST00000371121 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 KLHL41O60662 606 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 TOM1L1O75674 476 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 LYPLA2O95372 231 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 APOC2P02655 101 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 JUNP05412 331 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 GNAO1P09471 354 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 PKNOX1P55347 436 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 COG7P83436 770 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 TREML2Q5T2D2 321 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 FAM219BQ5XKK7 198 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 FIBCD1Q8N539 461 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 EMC1Q8N766 993 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 RNF169Q8NCN4 708 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 CMASQ8NFW8 434 aaPredicted RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 RIT2Q99578 217 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 PDLIM7Q9NR12 457 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 CDH7Q9ULB5 785 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 HES2Q9Y543 173 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 PCDHB4Q9Y5E5 795 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 APOEP02649 317 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 CCR10P46092 362 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 KCTD21Q4G0X4 260 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 PTPN20Q4JDL3 420 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 BRDTQ58F21 947 aaPredicted RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 FAM102BQ5T8I3 360 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 N4BP2L1Q5TBK1 243 aaPredicted RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms