RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SPDYCQ5MJ68 293 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 FAM102AQ5T9C2 384 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 N4BP2L1Q5TBK1 243 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 TSSK4Q6SA08 328 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 C4orf50Q6ZRC1 276 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 CELF5Q8N6W0 485 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 MYCBPAPQ8TBZ2 947 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 TEKT4Q8WW24 435 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 ALG3Q92685 438 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 MAGOHBQ96A72 148 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 CLDN23Q96B33 292 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 SUSD3Q96L08 255 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 RPP25Q9BUL9 199 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 COLEC11Q9BWP8 271 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 GOLPH3Q9H4A6 298 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 GOLGA2P5Q9HBQ8 144 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 LRRC4Q9HBW1 653 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 LTB4R2Q9NPC1 389 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 ZFP37Q9Y6Q3 630 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 TDRD15B5MCY1 1934 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 CASTOR2A6NHX0 329 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 HSF2BPO75031 334 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 RFPL2O75678 378 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 HEXIM1O94992 359 aaKnown RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 ADH1AP07327 375 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 PYGMP11217 842 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 KCNA4P22459 653 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 RFC1P35251 1148 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 SLC11A1P49279 550 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 AFF1P51825 1210 aaKnown RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 DR1Q01658 176 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 CAV1Q03135 178 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 PDE4CQ08493 712 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 TFDP2Q14188 446 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 TFDP3Q5H9I0 405 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 BEND6Q5SZJ8 279 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 ZFYVE27Q5T4F4 411 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 BEND5Q7L4P6 421 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 GET4Q7L5D6 327 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 DCP1BQ8IZD4 617 aaKnown RBP17.92■□□□□ 0.46
PHGDH-234ENST00000642041 ATL2Q8NHH9 583 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 UBA3Q8TBC4 463 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 IRGQQ8WZA9 623 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 SEC14L1Q92503 715 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 KRT35Q92764 455 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 LRRC45Q96CN5 670 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 SMARCD1Q96GM5 515 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 SYT15Q9BQS2 421 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 OSBPL8Q9BZF1 889 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 CNGB3Q9NQW8 809 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 SEMA4GQ9NTN9 838 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 HMGXB4Q9UGU5 601 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 STAP1Q9ULZ2 295 aa17.92■□□□□ 0.46
PHGDH-234ENST00000642041 RALGAPA1Q6GYQ0 2036 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 C2CD4BA6NLJ0 364 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 PPEF2O14830 753 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 GLUD1P00367 558 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 ALDH2P05091 517 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 PDGFRBP09619 1106 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 PDGFRAP16234 1089 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 RPS9P46781 194 aaKnown RBP17.91■□□□□ 0.46
PHGDH-234ENST00000642041 RPL7AP62424 266 aaKnown RBP17.91■□□□□ 0.46
PHGDH-234ENST00000642041 VSNL1P62760 191 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 CSRP2Q16527 193 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-234ENST00000642041 WSCD1Q658N2 575 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 SCARA3Q6AZY7 606 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 STRADAQ7RTN6 431 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 CCDC50Q8IVM0 306 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 ST13P5Q8NFI4 369 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-234ENST00000642041 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 CAVIN3Q969G5 261 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 NELL2Q99435 816 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 PIDD1Q9HB75 910 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 OGFRQ9NZT2 677 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 DNAJB4Q9UDY4 337 aa17.91■□□□□ 0.46
PHGDH-234ENST00000642041 DRG1Q9Y295 367 aaKnown RBP17.91■□□□□ 0.46
PHGDH-234ENST00000642041 SOBPA7XYQ1 873 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 E5RJQ4 531 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 GOLGA8SH3BPF8 625 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 NCAM2O15394 837 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 PRPSAP2O60256 369 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 FOXD2O60548 495 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-234ENST00000642041 ZFXP17010 805 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-234ENST00000642041 NRLP54845 237 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 LPAL2Q16609 132 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 DCAF12L1Q5VU92 463 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 CROCCP2Q86T23 111 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 KLHL7Q8IXQ5 586 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 COLGALT2Q8IYK4 626 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 C12orf29Q8N999 325 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 FGF14Q92915 247 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
PHGDH-234ENST00000642041 BTBD6Q96KE9 485 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 CEP295NLQ96MC4 621 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 PNKPQ96T60 521 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 ERP44Q9BS26 406 aa17.9■□□□□ 0.46
PHGDH-234ENST00000642041 MED10Q9BTT4 135 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms