RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 LRRC71Q8N4P6 559 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 VPS37AQ8NEZ2 397 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 SOCS4Q8WXH5 440 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PMM1Q92871 262 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 ZNF668Q96K58 619 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 MACROD1Q9BQ69 325 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 PLCB1Q9NQ66 1216 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 DNAJB11Q9UBS4 358 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 CFDP1Q9UEE9 299 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 DRG1Q9Y295 367 aaKnown RBP4.31□□□□□ -1.72
HDAC2-208ENST00000520746 LRCH1Q9Y2L9 728 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 COMMD10Q9Y6G5 202 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 FRMPD1Q5SYB0 1578 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 CFAP74Q9C0B2 1584 aa4.31□□□□□ -1.72
HDAC2-208ENST00000520746 ZNF518AQ6AHZ1 1483 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 NOTCH4Q99466 2003 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 ABHD14A-ACY1A0A1B0GW23 586 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 FAM234BA2RU67 622 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 E5RJQ4 531 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 AGPSO00116 658 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 QSOX1O00391 747 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 PODXLO00592 558 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 SOCS2O14508 198 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 SNX2O60749 519 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 COQ9O75208 318 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 BCAR3O75815 825 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 GABRB3P28472 473 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 NTSR1P30989 418 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 STARD3Q14849 445 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 PCID2Q5JVF3 399 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 FAXCQ5TGI0 409 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 NAPRTQ6XQN6 538 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 WDR53Q7Z5U6 358 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-208ENST00000520746 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 NRACQ8N912 160 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 FAM227BQ96M60 508 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 ASB2Q96Q27 587 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 GDF15Q99988 308 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 PCDHAC1Q9H158 963 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 SLC25A32Q9H2D1 315 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 ZBTB26Q9HCK0 441 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 TRNAU1APQ9NX07 287 aaKnown RBP4.3□□□□□ -1.72
HDAC2-208ENST00000520746 RGL1Q9NZL6 768 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 ZMYND8Q9ULU4 1186 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-208ENST00000520746 MAGED2Q9UNF1 606 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-208ENST00000520746 SH2B3Q9UQQ2 575 aa4.3□□□□□ -1.72
HDAC2-208ENST00000520746 CDK13Q14004 1512 aaKnown RBP4.3□□□□□ -1.72
HDAC2-208ENST00000520746 FMN1Q68DA7 1419 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 MYMKA6NI61 221 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 F5H423 210 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 HNRNPDLO14979 420 aaKnown RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 KCNQ3O43525 872 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 PLA2G6O60733 806 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 LDHAP00338 332 aaKnown RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 ENGP17813 658 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TPTEP56180 551 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TIRAPP58753 221 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TIAL1Q01085 375 aaKnown RBP eCLIP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 CHAF1AQ13111 956 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 C10orf62Q5T681 223 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 RAP1GAP2Q684P5 730 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 USP17L6PQ6QN14 398 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 CLEC9AQ6UXN8 241 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 DPY19L3Q6ZPD9 716 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 PARS2Q7L3T8 475 aaKnown RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 IRF2BP2Q7Z5L9 587 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 RAB11FIP4Q86YS3 637 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 NANOGP1Q8N7R0 232 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 CYP2W1Q8TAV3 490 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 MUL1Q969V5 352 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 RITA1Q96K30 269 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 SELENOOQ9BVL4 669 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 VN1R3Q9BXE9 311 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 WDR12Q9GZL7 423 aaKnown RBP4.29□□□□□ -1.72
HDAC2-208ENST00000520746 ZCWPW1Q9H0M4 648 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 DUSP22Q9NRW4 184 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TM7SF3Q9NS93 570 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TMOD4Q9NZQ9 345 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 SLC39A10Q9ULF5 831 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
HDAC2-208ENST00000520746 TTC37Q6PGP7 1564 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 WDR17Q8IZU2 1322 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 ZMYM4Q5VZL5 1548 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 ARHGEF12Q9NZN5 1544 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 AP4M1O00189 453 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 EXOC5O00471 708 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 CCNT2O60583 730 aaKnown RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 PRKCBP05771 671 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 DLDP09622 509 aaKnown RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 IL6STP40189 918 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms