RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	NEURL4	Q96JN8	1562 aa		6.59	□□□□□ -1.35
LINC01088-208	ENST00000511895	ABCA8	O94911	1581 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	IQGAP2	Q13576	1575 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	MT-CO3	P00414	261 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	APEH	P13798	732 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	SERPINB3	P29508	390 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	PPM1A	P35813	382 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	DGKQ	P52824	942 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	TUBA4A	P68366	448 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	MRPS21	P82921	87 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	NSUN2	Q08J23	767 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	FHL3	Q13643	280 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	ATP1A4	Q13733	1029 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	ACOX1	Q15067	660 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMTC4	Q5T4D3	741 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	MEX3C	Q5U5Q3	659 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	GRHL2	Q6ISB3	625 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	ZNF782	Q6ZMW2	699 aa	Predicted RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	C12orf76	Q8N812	135 aa	Predicted RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	ADAMTS18	Q8TE60	1221 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	IPO4	Q8TEX9	1081 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	NTN5	Q8WTR8	489 aa	Predicted RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	C18orf8	Q96DM3	657 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	EIF3C	Q99613	913 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	CINP	Q9BW66	212 aa	Predicted RBP	6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	STK33	Q9BYT3	514 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	TM7SF3	Q9NS93	570 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	ASIC5	Q9NY37	505 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	LRCH1	Q9Y2L9	728 aa		6.58	□□□□□ -1.36
LINC01088-208	ENST00000511895	CFAP74	Q9C0B2	1584 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	TISP43	B9A030	160 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	PRRT4	C9JH25	899 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	PLA2G6	O60733	806 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	SETSIP	P0DME0	302 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	CCDC15	Q0P6D6	951 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	MTAP	Q13126	283 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	RAB30	Q15771	203 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMEM196	Q5HYL7	178 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	DCDC5	Q6ZRR9	648 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	TTC30A	Q86WT1	665 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	RASGRP3	Q8IV61	690 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	DDB2	Q92466	427 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	RITA1	Q96K30	269 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	NECTIN3	Q9NQS3	549 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	DAAM1	Q9Y4D1	1078 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	PCDHB2	Q9Y5E7	798 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	STRCP1	A6NGW2	1772 aa		6.57	□□□□□ -1.36
LINC01088-208	ENST00000511895	ROBO1	Q9Y6N7	1651 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	TCRBV5S1A1T	A0A578	114 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	BTBD19	C9JJ37	291 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	ADAMTS3	O15072	1205 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	USP1	O94782	785 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	CHRM5	P08912	532 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	CYP2D6	P10635	497 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	GSTM5	P46439	218 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	C21orf58	P58505	322 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	CFHR3	Q02985	330 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	SRSF4	Q08170	494 aa	Known RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	KCNB1	Q14721	858 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	MFSD13A	Q14CX5	517 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	AASDH	Q4L235	1098 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	C4orf46	Q504U0	113 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	CC2D1B	Q5T0F9	858 aa	Known RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMEM63B	Q5T3F8	832 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	ARL6IP4	Q66PJ3	421 aa	Known RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	GGT6	Q6P531	493 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	C1orf228	Q6PIY5	440 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	TOGARAM2	Q6ZUX3	1019 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	DPF1	Q92782	380 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	WDR24	Q96S15	920 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	ADARB2	Q9NS39	739 aa	Known RBP	6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	VPS4A	Q9UN37	437 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	CNTLN	Q9NXG0	1405 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	KDM5C	P41229	1560 aa		6.56	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMEM232	C9JQI7	657 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	CLIC1	O00299	241 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	PIP5K1B	O14986	540 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	FYB1	O15117	783 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	PRAMEF2	O60811	474 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMIGD3	P0DMS9	266 aa	Predicted RBP	6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	HTR3A	P46098	478 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	PRELP	P51888	382 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	GPC5	P78333	572 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	AWAT1	Q58HT5	328 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	TLDC1	Q6P9B6	456 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	VSTM1	Q6UX27	236 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	ZNF575	Q86XF7	245 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	VPS37A	Q8NEZ2	397 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	EDC3	Q96F86	508 aa	Known RBP	6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	PRR11	Q96HE9	360 aa	Predicted RBP	6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	TMEM41A	Q96HV5	264 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	EPS8L2	Q9H6S3	715 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	SAP30L	Q9HAJ7	183 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	AGL	P35573	1532 aa		6.55	□□□□□ -1.36
LINC01088-208	ENST00000511895	UTRN	P46939	3433 aa		6.54	□□□□□ -1.36
LINC01088-208	ENST00000511895	NWD1	Q149M9	1564 aa		6.54	□□□□□ -1.36
LINC01088-208	ENST00000511895		J3KTA2	159 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms