RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 TTC3P53804 2025 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 POM121BA6NF01 834 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 C2CD4BA6NLJ0 364 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 TULP3O75386 442 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 RPS6KB1P23443 525 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 PBX1P40424 430 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 CPA2P48052 419 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 FHL1Q13642 323 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 ATP1A4Q13733 1029 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 LEXMQ3ZCV2 418 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 CRTC1Q6UUV9 634 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 RBM44Q6ZP01 1051 aaKnown RBP4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 C11orf96Q7Z7L8 435 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 ZDHHC17Q8IUH5 632 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 SAMD14Q8IZD0 417 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 PRR11Q96HE9 360 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 SNX27Q96L92 541 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 SENP7Q9BQF6 1050 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 SARGQ9BW04 601 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 FOXP1Q9H334 677 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 EBF3Q9H4W6 596 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 ERVK-5Q9HDB9 667 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 STARD7Q9NQZ5 370 aa4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-203ENST00000464654 C16orf96A6NNT2 1141 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 TLX3O43711 291 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 SGPL1O95470 568 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 SLC5A1P13866 664 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 HOXB6P17509 224 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 EGR1P18146 543 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 TFEBP19484 476 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 SCP2P22307 547 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 HOXA7P31268 230 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 IGHMBP2P38935 993 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 LINC00205P59089 165 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 IFIT5Q13325 482 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 MTX1Q13505 466 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 GLE1Q53GS7 698 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 RRAGBQ5VZM2 374 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 FAM57BQ71RH2 274 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 TFAP2DQ7Z6R9 452 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 PIM3Q86V86 326 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 CCDC28AQ8IWP9 274 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 UEVLDQ8IX04 471 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 AKAP1Q92667 903 aaKnown RBP eCLIP4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 LRRC46Q96FV0 321 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 C8orf48Q96LL4 319 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 GDF15Q99988 308 aa4.1□□□□□ -1.75
TM9SF3-203ENST00000464654 PRYO14603 147 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 KPNA5O15131 536 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TOMM40O96008 361 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 VIPP01282 170 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 SLC3A2P08195 630 aaKnown RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TRIM27P14373 513 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 NDUFS1P28331 727 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 GABRB3P28472 473 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 IDUAP35475 653 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 STT3AP46977 705 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 PRIM2P49643 509 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 SEMA3BQ13214 749 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TMEM196Q5HYL7 178 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 DPP9Q86TI2 863 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 MMP21Q8N119 569 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 CCDC33Q8N5R6 958 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 GLMPQ8WWB7 406 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 BRI3BPQ8WY22 251 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 PIGKQ92643 395 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 PMM1Q92871 262 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 GJA10Q969M2 543 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 ZNF845Q96IR2 970 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TUBB6Q9BUF5 446 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 AS3MTQ9HBK9 375 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 SEMA4BQ9NPR2 832 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TMEM45AQ9NWC5 275 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 ASNSD1Q9NWL6 643 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 CA14Q9ULX7 337 aa4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 TTBK1Q5TCY1 1321 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 ZNF335Q9H4Z2 1342 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-203ENST00000464654 CD8B2A6NJW9 211 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 F8W810 466 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 APOL1O14791 398 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 KIF3BO15066 747 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ZSCAN9O15535 394 aaPredicted RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 PSG1P11464 419 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 CYP19A1P11511 503 aaPredicted RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 DRD1P21728 446 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ZNF84P51523 738 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 NSUN2Q08J23 767 aaKnown RBP eCLIP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 MAPKAPK3Q16644 382 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 KLHDC7AQ5VTJ3 777 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 CCDC144NLQ6NUI1 221 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ACSM6Q6P461 480 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ZNF793Q6ZN11 406 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 RFX6Q8HWS3 928 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms