RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 KLHDC10Q6PID8 442 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 HTR3DQ70Z44 454 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 PDZD3Q86UT5 571 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 SYT12Q8IV01 421 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 HDDC3Q8N4P3 179 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 FRMD1Q8N878 549 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 SLC4A11Q8NBS3 891 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 FAXDC2Q96IV6 333 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 TSG101Q99816 390 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 DUSP16Q9BY84 665 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 DNAJC17Q9NVM6 304 aaKnown RBP15.37■□□□□ 0.05
SRRT-219ENST00000641476 RAB20Q9NX57 234 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 DEC1Q9P2X7 70 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 MBD1Q9UIS9 605 aaPredicted RBP15.37■□□□□ 0.05
SRRT-219ENST00000641476 NAGPAQ9UK23 515 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 NUDT5Q9UKK9 219 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 LOC400499M0QZD8 3231 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 ABCA7Q8IZY2 2146 aa15.37■□□□□ 0.05
SRRT-219ENST00000641476 MYO18AQ92614 2054 aaKnown RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 TCRBV21S2A2A0A5A6 115 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 TBC1D3BA6NDS4 549 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 NEDD8-MDP1E9PL57 170 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 H0Y626 953 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 TRIM24O15164 1050 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 CACNG3O60359 315 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 TRIM16O95361 564 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 PMS1P54277 932 aaKnown RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 RAD23BP54727 409 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 FAM193AP78312 1265 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 SEMA3BQ13214 749 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 C10orf120Q5SQS8 335 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 GRAMD4Q6IC98 578 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 Q6ZNB5 142 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 SCD5Q86SK9 330 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 TTC39CQ8N584 583 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 ZNF513Q8N8E2 541 aaPredicted RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 OLIG1Q8TAK6 271 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 BBS2Q9BXC9 721 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 POLMQ9NP87 494 aaPredicted RBP15.36■□□□□ 0.05
SRRT-219ENST00000641476 MARK1Q9P0L2 795 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 BCCIPQ9P287 314 aaKnown RBP eCLIP15.36■□□□□ 0.05
SRRT-219ENST00000641476 DNMT3LQ9UJW3 386 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 USP3Q9Y6I4 520 aa15.36■□□□□ 0.05
SRRT-219ENST00000641476 GOLGA6L4A6NEF3 574 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 SMC2O95347 1197 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 ZIC2O95409 532 aaPredicted RBP15.35■□□□□ 0.05
SRRT-219ENST00000641476 TYRP14679 529 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 P2RY2P41231 377 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 PSEN1P49768 467 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 SCAPQ12770 1279 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 COL28A1Q2UY09 1125 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 ARHGAP17Q68EM7 881 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 SLC23A3Q6PIS1 610 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 TPGS1Q6ZTW0 290 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 TRMT11Q7Z4G4 463 aaKnown RBP15.35■□□□□ 0.05
SRRT-219ENST00000641476 TADA2BQ86TJ2 420 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 MIB1Q86YT6 1006 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 SPATA20Q8TB22 786 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 HMGB4Q8WW32 186 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 SMARCE1Q969G3 411 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 TMEM176AQ96HP8 235 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 HEXIM2Q96MH2 286 aaKnown RBP15.35■□□□□ 0.05
SRRT-219ENST00000641476 FAM124BQ9H5Z6 455 aaPredicted RBP15.35■□□□□ 0.05
SRRT-219ENST00000641476 RASAL2Q9UJF2 1139 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 HCN2Q9UL51 889 aa15.35■□□□□ 0.05
SRRT-219ENST00000641476 GCN1Q92616 2671 aaKnown RBP15.34■□□□□ 0.05
SRRT-219ENST00000641476 UPK3BL1B0FP48 263 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 UPK3BL2E5RIL1 263 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 STC2O76061 302 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 CAPNS1P04632 268 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 RALAP11233 206 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 HOXB2P14652 356 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 ITPKAP23677 461 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 FKBP3Q00688 224 aaKnown RBP15.34■□□□□ 0.05
SRRT-219ENST00000641476 LRRC63Q05C16 580 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 GFPT1Q06210 699 aaPredicted RBP15.34■□□□□ 0.05
SRRT-219ENST00000641476 EGFLAMQ63HQ2 1017 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 PIGZQ86VD9 579 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 TATDN2Q93075 761 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 BHMTQ93088 406 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 XPO6Q96QU8 1125 aaKnown RBP15.34■□□□□ 0.05
SRRT-219ENST00000641476 CDK5RAP1Q96SZ6 601 aaKnown RBP15.34■□□□□ 0.05
SRRT-219ENST00000641476 CLIC5Q9NZA1 410 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 PILRBQ9UKJ0 227 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 COQ4Q9Y3A0 265 aa15.34■□□□□ 0.05
SRRT-219ENST00000641476 SETXQ7Z333 2677 aaKnown RBP15.33■□□□□ 0.05
SRRT-219ENST00000641476 CACNA1EQ15878 2313 aa15.33■□□□□ 0.05
SRRT-219ENST00000641476 FAM221BA6H8Z2 402 aa15.33■□□□□ 0.04
SRRT-219ENST00000641476 OPHN1O60890 802 aa15.33■□□□□ 0.04
SRRT-219ENST00000641476 PLA2G4AP47712 749 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms