RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 STK32AQ8WU08 396 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 PLD4Q96BZ4 506 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 NUP62CLQ9H1M0 184 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 DNAJC17Q9NVM6 304 aaKnown RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 HBS1LQ9Y450 684 aaKnown RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 PRR5-ARHGAP8B1AHC4 643 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 M0QYV0 167 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 SGK1O00141 431 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 TRIM24O15164 1050 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 MED7O43513 233 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 FOXD2O60548 495 aaPredicted RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 ADAM23O75077 832 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 KLF8O95600 359 aaPredicted RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 PENKP01210 267 aaPredicted RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 HMBSP08397 361 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 KRT5P13647 590 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 LCP1P13796 627 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 SLC9A1P19634 815 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 SDHBP21912 280 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 PON1P27169 355 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 CORO1AP31146 461 aaKnown RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 ACADSBP45954 432 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 MTIF2P46199 727 aaKnown RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 HARS2P49590 506 aaKnown RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 DGKGP49619 791 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 ARHGAP8P85298 464 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 LMNB2Q03252 620 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 KDSRQ06136 332 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 SPEM2Q0P670 501 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 CSRP2Q16527 193 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 USP39Q53GS9 565 aaKnown RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 FYB2Q5VWT5 728 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 TMEM92Q6UXU6 159 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 KBTBD6Q86V97 674 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 C11orf74Q86VG3 221 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 DENND1CQ8IV53 801 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 FMNL3Q8IVF7 1028 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 FAM217AQ8IXS0 508 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 ZNF606Q8WXB4 792 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 POLMQ9NP87 494 aaPredicted RBP11□□□□□ -0.65
CCDC9-203ENST00000596938 PARD6AQ9NPB6 346 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 APEX2Q9UBZ4 518 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
CCDC9-203ENST00000596938 ZNF638Q14966 1978 aaKnown RBP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SART1O43290 800 aaKnown RBP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 LATS1O95835 1130 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 CALCAP01258 141 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 LTFP02788 710 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 CYBBP04839 570 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 HNRNPLP14866 589 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 NTSR1P30989 418 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 RGS7P49802 495 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 ZNF445P59923 1031 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 FOXK2Q01167 660 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 MAN2A1Q16706 1144 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 PLK5Q496M5 336 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 VWA3BQ502W6 1294 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 MSANTD2Q6P1R3 559 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 BEND5Q7L4P6 421 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 TMEM110Q86TL2 294 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 ZNF513Q8N8E2 541 aaPredicted RBP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 OLIG1Q8TAK6 271 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SHC3Q92529 594 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 EDEM1Q92611 657 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 GOLGA1Q92805 767 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 RMDN1Q96DB5 314 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SLC4A5Q9BY07 1137 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SLC2A11Q9BYW1 496 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 DUSP15Q9H1R2 295 aaPredicted RBP10.99□□□□□ -0.65
CCDC9-203ENST00000596938 NDST4Q9H3R1 872 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SEMA4GQ9NTN9 838 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 DLL3Q9NYJ7 618 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 SFMBT1Q9UHJ3 866 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 HCN2Q9UL51 889 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 PCDHGA5Q9Y5G8 931 aa10.99□□□□□ -0.65
CCDC9-203ENST00000596938 BECN2A8MW95 431 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 PRRT4C9JH25 899 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 GFRA2O00451 464 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 NPC1O15118 1278 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 TIMM44O43615 452 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 RHOBTB1O94844 696 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 FYNP06241 537 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 GNA15P30679 374 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 RING1Q06587 406 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC9-203ENST00000596938 E2F5Q15329 346 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 ELF2Q15723 593 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 MPPE1Q53F39 396 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 MIIPQ5JXC2 388 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 ADGRF1Q5T601 910 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms