RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 VCPP55072 806 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 PIGHQ14442 188 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 TREML2Q5T2D2 321 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 PPP1R2P3Q6NXS1 205 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 ZNF449Q6P9G9 518 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 APOBEC3FQ8IUX4 373 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 WDR49Q8IV35 697 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 C19orf47Q8N9M1 422 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 CHST13Q8NET6 341 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 JOSD2Q8TAC2 188 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 HEXIM2Q96MH2 286 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 RPF1Q9H9Y2 349 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 NOD2Q9HC29 1040 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 SLCO1B3Q9NPD5 702 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 TRIM33Q9UPN9 1127 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 CSADQ9Y600 493 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 PTCH2Q9Y6C5 1203 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 hCG_1818297A0A087WSY0 165 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 H7C0C1 242 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 FARP2O94887 1054 aaPredicted RBP5.59□□□□□ -1.52
VAPA-203ENST00000577539 ATP5OP48047 213 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 NRLP54845 237 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 GAD2Q05329 585 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 PTP4A2Q12974 167 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 XRCC4Q13426 336 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 HSDL1Q3SXM5 330 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 PTPN20Q4JDL3 420 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 ATF7IP2Q5U623 682 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 OR6B2Q6IFH4 312 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 CTAGE3PQ8IX95 158 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 FAM71DQ8N9W8 422 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 UBA3Q8TBC4 463 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 COPS5Q92905 334 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 MAGEB18Q96M61 343 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 SPATA33Q96N06 139 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 TTC25Q96NG3 672 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 CLUHP3Q96NS8 147 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 PCYT2Q99447 389 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 ADAM19Q9H013 955 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 L3MBTL1Q9Y468 752 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 STYXL1Q9Y6J8 313 aa5.59□□□□□ -1.52
VAPA-203ENST00000577539 A0A1W2PPM1 405 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 DCDC2BA2VCK2 349 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 SOBPA7XYQ1 873 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 M0QYV0 167 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 KLRC2P26717 231 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 ALDH3A1P30838 453 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 FOXN2P32314 431 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 AP3M2P53677 418 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 EIF3EP60228 445 aaKnown RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 YWHAGP61981 247 aaKnown RBP eCLIP5.58□□□□□ -1.52
VAPA-203ENST00000577539 YWHAEP62258 255 aaKnown RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 GPLD1P80108 840 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 MCL1Q07820 350 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 TFDP1Q14186 410 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 INO80DQ53TQ3 878 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 FAM102AQ5T9C2 384 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 DARS2Q6PI48 645 aaKnown RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 ZPBP2Q6X784 338 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 C3orf62Q6ZUJ4 267 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 ALLCQ8N6M5 410 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 PRCCQ92733 491 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 ERP27Q96DN0 273 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 CCDC134Q9H6E4 229 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 SUSD2Q9UGT4 822 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 CHMP2BQ9UQN3 213 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 KIF13BQ9NQT8 1826 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 LCE2BO14633 110 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 MCF2LO15068 1137 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 MAFO75444 373 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 ATP6V1G2O95670 118 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 ITGB3P05106 788 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 GSTA1P08263 222 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 KRT7P08729 469 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 CD48P09326 243 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 RBP3P10745 1247 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 NQO1P15559 274 aaKnown RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 KRT4P19013 534 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 TAC1P20366 129 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 SLC8A1P32418 973 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 PHBP35232 272 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 RPA3P35244 121 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 MSH2P43246 934 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 RGS7P49802 495 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 ARL4CP56559 192 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 NCALDP61601 193 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 MYO1EQ12965 1108 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 MMRN1Q13201 1228 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 EFTUD2Q15029 972 aaKnown RBP eCLIP5.58□□□□□ -1.52
VAPA-203ENST00000577539 SURF1Q15526 300 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 LVRNQ6Q4G3 990 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 METTL7BQ6UX53 244 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 FBXO16Q8IX29 292 aaPredicted RBP5.58□□□□□ -1.52
VAPA-203ENST00000577539 TMEM192Q8IY95 271 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 PDIK1LQ8N165 341 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 FITM2Q8N6M3 262 aa5.58□□□□□ -1.52
VAPA-203ENST00000577539 DNERQ8NFT8 737 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms