RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PPP6R3Q5H9R7 873 aaPredicted RBP14.32□□□□□ -0.12
TPM1-215ENST00000558868 RTP2Q5QGT7 225 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 KIAA1841Q6NSI8 718 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 KCNT2Q6UVM3 1135 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 BHLHA9Q7RTU4 235 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 CCDC185Q8N715 623 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 RSAD2Q8WXG1 361 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 PIK3R5Q8WYR1 880 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 ART4Q93070 314 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 HAUS1Q96CS2 278 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 VWCEQ96DN2 955 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 SPATA17Q96L03 361 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 FOXP3Q9BZS1 431 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 PCDH9Q9HC56 1237 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 AAASQ9NRG9 546 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 ZDHHC18Q9NUE0 388 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 DDIT4Q9NX09 232 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.32□□□□□ -0.12
TPM1-215ENST00000558868 GRHL1Q9NZI5 618 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 MTRRQ9UBK8 725 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 FBXW11Q9UKB1 542 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 CENPFP49454 3210 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 MTMR11A4FU01 709 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 GOLGA6BA6NDN3 693 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 SGK1O00141 431 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 FAM153BP0C7A2 387 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 HAPLN1P10915 354 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 IL4RP24394 825 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 STIP1P31948 543 aaKnown RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 ADRA1BP35368 520 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 CXCR3P49682 368 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 PSEN1P49768 467 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 CDR1P51861 262 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 ATXN1P54253 815 aaKnown RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 ROR1Q01973 937 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 BTG3Q14201 252 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 PSMD5Q16401 504 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 CA9Q16790 459 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 FAM153CQ494X1 144 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 CFAP58Q5T655 872 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 OTUD1Q5VV17 481 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 SLC8B1Q6J4K2 584 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 PCGF5Q86SE9 256 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 RNF168Q8IYW5 571 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 RNF139Q8WU17 664 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 BCL7CQ8WUZ0 217 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 TMEM169Q96HH4 297 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 GDAP1L1Q96MZ0 367 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 FAM118BQ9BPY3 351 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 HERC2P3Q9BVR0 1158 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
TPM1-215ENST00000558868 MED4Q9NPJ6 270 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 PIGVQ9NUD9 493 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 SPG21Q9NZD8 308 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 IL37Q9NZH6 218 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 HCSTQ9UBK5 93 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 FAM153AQ9UHL3 310 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
TPM1-215ENST00000558868 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 OPA1O60313 960 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 SOD2P04179 222 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 RBP3P10745 1247 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 KLRC2P26717 231 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PPM1AP35813 382 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PBX3P40426 434 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 HCAR3P49019 387 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 TUFMP49411 452 aaKnown RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 XRCC4Q13426 336 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 BRMS1LQ5PSV4 323 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 DARS2Q6PI48 645 aaKnown RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 ZDHHC24Q6UX98 284 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PDZD4Q76G19 769 aaPredicted RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 CDKL3Q8IVW4 592 aaPredicted RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 GPR65Q8IYL9 337 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 SLC39A11Q8N1S5 342 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 GOLGA6L1Q8N7Z2 621 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PCDH19Q8TAB3 1148 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 SCAMP5Q8TAC9 235 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 RIN2Q8WYP3 895 aaPredicted RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 EDEM1Q92611 657 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 RNF34Q969K3 372 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 B3GALT6Q96L58 329 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 PGLYRP2Q96PD5 576 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 CSPG4P5Q96PW8 444 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 ADAM33Q9BZ11 813 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 NEUROG2Q9H2A3 272 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 WDCPQ9H6R7 721 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 MTMR10Q9NXD2 777 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms