RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SLC8A2Q9UPR5 921 aa17.99■□□□□ 0.47
SFSWAP-205ENST00000537164 SPAG17Q6Q759 2223 aa17.99■□□□□ 0.47
SFSWAP-205ENST00000537164 SLC12A8A0AV02 714 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 HRO43593 1189 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 LTFP02788 710 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 TYRP14679 529 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 CORO1AP31146 461 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 HOXC13P31276 330 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 DMC1Q14565 340 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 CCDC183Q5T5S1 534 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 DENND1BQ6P3S1 775 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 SASS6Q6UVJ0 657 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 TERB1Q8NA31 727 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 RNF139Q8WU17 664 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 EDEM1Q92611 657 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 RUBCNQ92622 972 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 XPO6Q96QU8 1125 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 BBS2Q9BXC9 721 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 CYTH4Q9UIA0 394 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 STOML2Q9UJZ1 356 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 DNAJC12Q9UKB3 198 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 MMP17Q9ULZ9 603 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 SMG5Q9UPR3 1016 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 STARD13Q9Y3M8 1113 aa17.98■□□□□ 0.47
SFSWAP-205ENST00000537164 DCHS1Q96JQ0 3298 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 ANTXRLA6NF34 631 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 NEDD8-MDP1E9PL57 170 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 FOXN3O00409 490 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 SART1O43290 800 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 THAP12O43422 761 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 LATS1O95835 1130 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 IGLV3-27P01718 113 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 FYNP06241 537 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 CLCN1P35523 988 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 C2orf27AQ580R0 203 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 KLHDC7AQ5VTJ3 777 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 FYB2Q5VWT5 728 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 TPGS1Q6ZTW0 290 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 NUDT18Q6ZVK8 323 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 SCUBE3Q8IX30 993 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 FAM71AQ8IYT1 594 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 NAT16Q8N8M0 369 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 IL17RCQ8NAC3 791 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 CLEC4CQ8WTT0 213 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 P2RY11Q96G91 374 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 NAA15Q9BXJ9 866 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 LHX5Q9H2C1 402 aa17.97■□□□□ 0.47
SFSWAP-205ENST00000537164 GFRA2O00451 464 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 PIK3R2O00459 728 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 HMBSP08397 361 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 CISD3P0C7P0 127 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 PTK2Q05397 1052 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 KDSRQ06136 332 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 RING1Q06587 406 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 STX1AQ16623 288 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 DENND1CQ8IV53 801 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 WDTC1Q8N5D0 677 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 DNAJC17Q9NVM6 304 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 SFMBT1Q9UHJ3 866 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 SLC27A6Q9Y2P4 619 aa17.96■□□□□ 0.47
SFSWAP-205ENST00000537164 TBC1D3BA6NDS4 549 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 TRIM24O15164 1050 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 PAPSS1O43252 624 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 APBB3O95704 486 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 UCHL3P15374 230 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 USP8P40818 1118 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 HARS2P49590 506 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 SEC13P55735 322 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 ZNF445P59923 1031 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 PDCLQ13371 301 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 NNTQ13423 1086 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 KRT31Q15323 416 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 CRY1Q16526 586 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 HEATR6Q6AI08 1181 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 LAIR1Q6GTX8 287 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 GRAMD4Q6IC98 578 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 RASSF3Q86WH2 238 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 GAB3Q8WWW8 586 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 GOLGA1Q92805 767 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 AZIN2Q96A70 460 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 TRIM62Q9BVG3 475 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 IRX2Q9BZI1 471 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 MIS12Q9H081 205 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 ST7Q9NRC1 585 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 FANCLQ9NW38 375 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 TMEM63CQ9P1W3 806 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 HCN2Q9UL51 889 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 LAMA1P25391 3075 aa17.95■□□□□ 0.46
SFSWAP-205ENST00000537164 LRRC10BA6NIK2 292 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 E5RJQ4 531 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 DGKGP49619 791 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 DGKEP52429 567 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 BPIFB4P59827 614 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 MYL5Q02045 173 aa17.94■□□□□ 0.46
SFSWAP-205ENST00000537164 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms